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Os08g0351700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.78 (0.0422) R2 : 0.558
β1 : -2.56 (0.155) R2dD : 0.277 R2D : 0.308
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.25 (0.0902) R2dN8 : 0.249 R2N8 : 0.281
σ : 0.793
deviance : 287.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
264.45 0.764 7.77 -2.5 0.381 0.0367 2.09 2.15 1.26 9.03 18.63 4 -- --
269.73 0.765 7.76 -2.55 0.434 -0.491 0.457 -- 1.24 6.08 49.78 7 -- --
270.92 0.767 7.77 -2.55 0.389 -0.259 -- 1.76 1.25 6.54 40.01 2 -- --
270.85 0.767 7.77 -2.53 0.368 -0.601 -- -- 1.22 5.94 49.84 7 -- --
278.13 0.777 7.78 -2.53 -- -0.303 -- 1.65 1.26 -- 40 5 -- --
277.56 0.781 7.77 -2.59 0.395 -- 0.859 -- 1.24 6.81 -- -- -- --
279.33 0.783 7.77 -2.57 0.398 -- -- -- 1.24 7.24 -- -- -- --
278.9 0.778 7.78 -2.52 -- -0.602 -- -- 1.24 -- 49.72 7 -- --
438.6 0.975 7.71 -- 0.428 -0.775 -- -- 1.49 5.95 49.84 7 -- --
287.72 0.793 7.78 -2.56 -- -- -- -- 1.25 -- -- -- -- --
453.47 0.996 7.7 -- 0.375 -- -- -- 1.53 7.68 -- -- -- --
445.18 0.983 7.71 -- -- -0.805 -- -- 1.52 -- 49.72 7 -- --
461.05 1 7.71 -- -- -- -- -- 1.53 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 250.44 wind 9 1440 < th dose independent rect. 9 1
2 252.99 wind 9 1440 < th dose independent rect. 7 3
3 253.01 wind 9 1440 < th dose independent rect. 24 10
7 254.23 wind 9 1440 > th dose independent rect. 9 1
18 256.82 humidity 80 4320 < th dose dependent rect. 3 5
21 257.36 wind 7 1440 > th dose dependent rect. 8 2
28 258.28 wind 1 270 < th dose dependent rect. 22 1
54 259.64 wind 3 1440 < th dose dependent rect. 22 1
67 260.57 wind 1 14400 < th dose independent rect. 9 4
71 261.15 wind 1 14400 < th dose dependent rect. 9 4
73 261.20 humidity 60 4320 < th dose independent rect. 17 18
74 261.25 wind 1 14400 < th dose independent rect. 12 1
75 261.25 wind 1 270 < th dose independent rect. 22 1
76 261.27 humidity 90 1440 > th dose independent rect. 3 2
77 261.32 temperature 25 90 > th dose independent rect. 2 7
78 261.34 humidity 80 4320 < th dose dependent rect. 21 12
79 261.38 humidity 60 4320 < th dose dependent rect. 17 19
88 261.66 wind 1 14400 < th dose independent rect. 9 2
90 261.70 wind 3 1440 < th dose independent rect. 22 1
104 261.97 humidity 60 4320 > th dose independent rect. 17 17
105 261.99 wind 1 14400 > th dose independent rect. 16 6
106 262.01 wind 9 43200 < th dose independent rect. 23 2
114 262.08 wind 1 14400 > th dose independent rect. 9 4
117 262.12 wind 1 14400 > th dose independent rect. 16 4
118 262.12 wind 1 14400 < th dose dependent rect. 9 2
122 262.26 wind 1 14400 > th dose independent rect. 9 2
128 262.35 radiation 20 10 < th dose independent rect. 24 20
129 262.43 humidity 80 4320 < th dose independent rect. 2 6
135 262.50 humidity 80 4320 > th dose independent rect. 23 1
144 262.62 wind 7 1440 > th dose independent rect. 3 1
145 262.62 wind 7 1440 > th dose dependent rect. 3 1
158 262.74 humidity 90 1440 > th dose independent rect. 3 6
159 262.74 humidity 80 4320 < th dose dependent rect. 5 1
168 262.85 temperature 15 90 > th dose dependent rect. 2 7
170 262.88 humidity 90 1440 < th dose independent rect. 4 1
174 262.90 humidity 60 4320 < th dose dependent rect. 11 1
188 263.00 humidity 90 1440 > th dose independent rect. 2 9
189 263.00 humidity 60 4320 < th dose dependent rect. 8 4
210 263.07 wind 3 1440 > th dose independent rect. 22 1
221 263.13 humidity 70 4320 > th dose independent rect. 19 1
225 263.14 temperature 25 30 > th dose dependent rect. 4 5
235 263.20 radiation 30 90 > th dose independent rect. 10 2
236 263.21 wind 1 14400 > th dose independent rect. 12 1
242 263.31 wind 1 14400 < th dose independent rect. 16 6
243 263.31 humidity 80 4320 < th dose independent rect. 21 11
249 263.33 wind 1 14400 > th dose independent rect. 8 9
261 263.39 wind 1 14400 < th dose independent rect. 8 9
266 263.42 wind 1 14400 < th dose independent rect. 8 15
273 263.44 radiation 40 4320 > th dose independent rect. 7 4
278 263.44 humidity 80 4320 > th dose independent rect. 23 9
282 263.44 wind 1 14400 < th dose independent rect. 8 12
307 263.53 wind 9 4320 < th dose independent rect. 20 14
308 263.53 temperature 25 30 > th dose dependent rect. 6 3
311 263.57 wind 1 14400 < th dose independent rect. 16 4
317 263.58 temperature 25 10 > th dose dependent rect. 23 10
321 263.60 humidity 60 4320 < th dose dependent sin 9 NA
338 263.71 humidity 60 4320 < th dose independent sin 10 NA
339 263.71 humidity 60 4320 < th dose independent rect. 17 1
343 263.72 humidity 70 4320 < th dose independent rect. 19 1
348 263.73 wind 1 43200 < th dose dependent rect. 16 5
349 263.73 atmosphere 995 90 > th dose dependent rect. 1 8
375 263.86 wind 1 14400 < th dose dependent rect. 9 11
376 263.86 temperature 10 90 > th dose dependent rect. 22 11
377 263.87 humidity 50 1440 > th dose independent rect. 24 12
384 263.90 humidity 90 4320 < th dose independent rect. 8 1
386 263.90 wind 1 14400 > th dose independent rect. 8 12
396 263.96 wind 1 14400 < th dose dependent rect. 12 1
400 263.99 radiation 40 10 > th dose independent rect. 11 2
406 264.02 wind 1 90 > th dose independent rect. 1 8
429 264.09 radiation 20 90 > th dose dependent rect. 10 2
437 264.12 wind 1 14400 < th dose dependent rect. 9 14
485 264.28 humidity 60 4320 > th dose independent rect. 17 1
494 264.31 radiation 20 10 < th dose independent sin 3 NA
498 264.31 atmosphere 1015 720 < th dose independent rect. 12 21
504 264.33 humidity 80 4320 > th dose independent rect. 8 1
512 264.34 humidity 70 1440 > th dose dependent rect. 3 6
520 264.37 temperature 30 270 < th dose independent rect. 12 7
545 264.42 temperature 10 720 > th dose dependent rect. 21 3
546 264.43 humidity 50 4320 > th dose independent rect. 7 3
559 264.47 wind 1 14400 > th dose independent rect. 8 15
562 264.47 wind 1 270 < th dose dependent rect. 9 14
580 264.54 atmosphere 995 90 > th dose dependent rect. 3 6
613 264.57 wind 7 4320 > th dose dependent rect. 20 14
619 264.59 wind 7 4320 > th dose independent rect. 21 1
621 264.60 atmosphere 1000 90 > th dose independent rect. 1 8
623 264.60 wind 7 4320 > th dose independent rect. 20 14
624 264.62 humidity 60 4320 > th dose independent sin 10 NA
632 264.63 wind 1 14400 < th dose dependent rect. 9 9
634 264.64 humidity 60 14400 > th dose independent rect. 1 7
655 264.71 atmosphere 1015 720 < th dose independent rect. 21 3
659 264.71 humidity 50 1440 > th dose independent rect. 4 8
670 264.73 radiation 40 270 < th dose independent rect. 23 10
680 264.75 wind 5 4320 > th dose independent rect. 20 17
706 264.81 radiation 40 4320 > th dose dependent rect. 9 2
773 264.88 atmosphere 1015 90 < th dose independent rect. 22 11
787 264.93 temperature 30 14400 > th dose dependent rect. 8 1
805 264.94 wind 5 4320 < th dose independent rect. 20 17
807 264.95 radiation 40 4320 > th dose independent sin 10 NA
815 264.96 humidity 60 4320 < th dose independent rect. 8 3
835 264.97 humidity 70 1440 > th dose dependent rect. 8 1
839 264.99 humidity 60 4320 > th dose independent rect. 17 4
842 264.99 humidity 60 4320 > th dose independent rect. 17 8
846 264.99 radiation 30 10 > th dose dependent rect. 11 2
850 265.00 radiation 1 90 < th dose independent rect. 11 8
856 265.00 humidity 80 1440 > th dose dependent rect. 3 2
864 265.01 humidity 60 4320 > th dose independent rect. 17 13
885 265.03 radiation 10 10 > th dose dependent rect. 10 3
887 265.04 humidity 80 4320 < th dose independent sin 9 NA
891 265.04 radiation 20 10 < th dose independent rect. 6 14
894 265.04 wind 9 1440 < th dose dependent rect. 2 8
897 265.05 temperature 25 14400 < th dose independent rect. 3 6
898 265.05 wind 1 270 > th dose independent rect. 12 7
901 265.05 wind 9 1440 < th dose dependent rect. 4 6
959 265.09 temperature 25 14400 > th dose independent rect. 3 6
968 265.10 wind 7 4320 < th dose independent rect. 21 1