Os08g0351300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0351300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 446.77 | 0.993 | 7.97 | 6.22 | 4.75 | 2.71 | 2.4 | 1.73 | 0.981 | 18 | 20 | 4972 | -- | -- |
| 450.1 | 0.988 | 8.03 | 6.02 | 4.75 | 2.32 | 2.43 | -- | 0.941 | 18 | 20.07 | 4907 | -- | -- |
| 460.93 | 1 | 7.96 | 6.19 | 4.76 | 2.74 | -- | 1.78 | 0.984 | 18 | 20.02 | 4970 | -- | -- |
| 463.11 | 1 | 8.02 | 6.06 | 4.82 | 2.32 | -- | -- | 0.967 | 17.9 | 20.03 | 3971 | -- | -- |
| 1635.71 | 1.88 | 7.88 | 6.04 | -- | 2.78 | -- | 1.9 | 0.858 | -- | 20.1 | 4906 | -- | -- |
| 540.96 | 1.09 | 7.89 | 7.47 | 4.76 | -- | 2.54 | -- | 1.57 | 18 | -- | -- | -- | -- |
| 556.79 | 1.1 | 7.89 | 7.45 | 4.77 | -- | -- | -- | 1.58 | 18 | -- | -- | -- | -- |
| 1639.88 | 1.89 | 7.95 | 5.9 | -- | 2.31 | -- | -- | 0.87 | -- | 20.01 | 3467 | -- | -- |
| 557.24 | 1.1 | 8.4 | -- | 4.79 | 6.06 | -- | -- | -0.694 | 18 | 18.5 | 47520 | -- | -- |
| 1737.15 | 1.95 | 7.8 | 7.31 | -- | -- | -- | -- | 1.48 | -- | -- | -- | -- | -- |
| 2017.69 | 2.1 | 8.07 | -- | 4.66 | -- | -- | -- | 0.754 | 18.1 | -- | -- | -- | -- |
| 1748.03 | 1.95 | 8.31 | -- | -- | 5.92 | -- | -- | -0.755 | -- | 18.43 | 47520 | -- | -- |
| 3145.27 | 2.62 | 7.99 | -- | -- | -- | -- | -- | 0.665 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 424.75 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 2 | 425.91 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 3 | 425.97 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 15 | 426.95 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 38 | 428.47 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 42 | 428.68 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 50 | 429.04 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 69 | 429.24 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 15 | NA |
| 71 | 429.31 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 73 | 429.34 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 104 | 430.26 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 136 | 430.67 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 177 | 431.28 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 207 | 431.66 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 262 | 431.96 | radiation | 10 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 334 | 432.38 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 388 | 432.69 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 412 | 432.80 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 437 | 432.98 | radiation | 30 | 43200 | < th | dose independent | sin | 15 | NA |
| 526 | 433.21 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 527 | 433.21 | radiation | 20 | 43200 | > th | dose dependent | sin | 14 | NA |
| 560 | 433.37 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 565 | 433.39 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 582 | 433.41 | radiation | 40 | 43200 | > th | dose dependent | sin | 14 | NA |
| 624 | 433.56 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 648 | 433.73 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 17 |
| 751 | 433.95 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 755 | 433.97 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 767 | 434.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 775 | 434.05 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 18 | NA |
| 806 | 434.19 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 876 | 434.43 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 917 | 434.51 | radiation | 20 | 43200 | < th | dose dependent | sin | 12 | NA |
| 948 | 434.60 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 955 | 434.62 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 986 | 434.70 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 994 | 434.70 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 20 | 23 |