Os08g0346900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0346900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346.74 | 0.875 | 3.19 | 1.02 | 1.19 | 0.826 | 1.83 | 2.42 | 0.535 | 4.24 | 21.9 | 368 | -- | -- |
| 366.8 | 0.892 | 3.3 | 0.29 | 1.22 | 0.801 | 0.686 | -- | 0.291 | 4.28 | 22.1 | 327 | -- | -- |
| 354.13 | 0.876 | 3.2 | 1.02 | 1.16 | 0.829 | -- | 2.44 | 0.505 | 4.33 | 22 | 510 | -- | -- |
| 367.2 | 0.892 | 3.27 | 0.276 | 1.19 | 0.774 | -- | -- | 0.345 | 4.18 | 22.18 | 321 | -- | -- |
| 413.83 | 0.947 | 3.21 | 1.09 | -- | 0.808 | -- | 2.48 | 0.519 | -- | 22.3 | 1209 | -- | -- |
| 398.73 | 0.936 | 3.21 | 0.53 | 1.04 | -- | 0.6 | -- | 0.601 | 4.22 | -- | -- | -- | -- |
| 399.74 | 0.936 | 3.22 | 0.524 | 1.05 | -- | -- | -- | 0.598 | 4.23 | -- | -- | -- | -- |
| 425.57 | 0.961 | 3.34 | 0.673 | -- | 1.18 | -- | -- | 0.241 | -- | 24.6 | 1146 | -- | -- |
| 369.05 | 0.895 | 3.28 | -- | 1.21 | 0.805 | -- | -- | 0.301 | 4.13 | 22.24 | 301 | -- | -- |
| 459.16 | 1 | 3.22 | 0.566 | -- | -- | -- | -- | 0.625 | -- | -- | -- | -- | -- |
| 406.98 | 0.944 | 3.23 | -- | 1.06 | -- | -- | -- | 0.539 | 4.22 | -- | -- | -- | -- |
| 418.31 | 0.953 | 3.32 | -- | -- | 1.15 | -- | -- | 0.185 | -- | 24.69 | 1222 | -- | -- |
| 467.62 | 1.01 | 3.24 | -- | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 341.90 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 6 | 342.67 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 26 | 344.95 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 41 | 345.88 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 45 | 346.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 66 | 347.53 | temperature | 25.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 129 | 350.17 | temperature | 20.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 160 | 351.31 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 180 | 352.15 | temperature | 25.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 232 | 353.65 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 233 | 353.73 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 261 | 354.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 262 | 354.33 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 263 | 354.35 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 284 | 354.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 296 | 355.09 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 358 | 356.23 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 409 | 357.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 411 | 357.29 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 415 | 357.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 446 | 357.68 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 453 | 357.76 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 490 | 358.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 531 | 358.70 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 535 | 358.77 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 541 | 358.86 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 562 | 359.05 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 579 | 359.25 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 641 | 359.75 | temperature | 25.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 770 | 360.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 793 | 360.92 | temperature | 10.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 800 | 360.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 801 | 360.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 804 | 360.97 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 11 |
| 851 | 361.33 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 902 | 361.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 913 | 361.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 22 |
| 929 | 361.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 936 | 362.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 941 | 362.02 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 942 | 362.02 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 990 | 362.38 | temperature | 25.0 | 720 | < th | dose independent | sin | 14 | NA |
| 994 | 362.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 4 |