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Os08g0346400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0136) R2 : 0.409
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.624 (0.0351) R2dC : 0.411 R2C : 0.409
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0133 (0.0287) R2dN8 : 0.000359 R2N8 : -0.002
σ : 0.257
deviance : 30.15
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_____
C
peak time of C : 7.55
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.97 0.22 11 -0.581 0.626 -0.324 0.0946 1.38 -0.145 7.12 25.2 15 -- --
23.85 0.227 11 -0.405 0.624 -0.892 0.0419 -- -0.0339 7.65 19.28 224 -- --
21.99 0.218 11 -0.579 0.627 -0.324 -- 1.37 -0.145 7.12 25.2 14 -- --
23.64 0.226 11 -0.419 0.63 -0.981 -- -- -0.0601 7.35 19.31 211 -- --
42.39 0.305 11 -0.541 -- -0.371 -- 1.31 -0.118 -- 23.89 7 -- --
28.14 0.249 11 -0.274 0.626 -- -0.0407 -- -0.0174 7.53 -- -- -- --
28.15 0.248 11 -0.275 0.626 -- -- -- -0.0174 7.52 -- -- -- --
43.88 0.309 11 -0.416 -- -1.33 -- -- -0.0465 -- 16 1519 -- --
27.73 0.245 11 -- 0.624 -0.705 -- -- -0.011 7.47 18.95 158 -- --
49.13 0.328 11 -0.266 -- -- -- -- -0.00764 -- -- -- -- --
30.15 0.257 10.9 -- 0.624 -- -- -- 0.0133 7.55 -- -- -- --
47.93 0.322 11 -- -- -0.946 -- -- 0.0035 -- 15.9 1415 -- --
51 0.333 11 -- -- -- -- -- 0.0219 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.51 radiation 1 4320 < th dose dependent rect. 15 1
2 21.58 radiation 1 4320 > th dose independent rect. 15 1
3 21.58 radiation 1 4320 < th dose independent rect. 15 1
4 21.66 temperature 10 43200 > th dose independent rect. 9 11
10 21.84 temperature 10 43200 > th dose independent rect. 12 9
13 21.91 temperature 25 10 < th dose dependent rect. 1 23
15 21.95 temperature 25 10 < th dose dependent rect. 5 23
17 21.96 temperature 25 10 < th dose dependent rect. 9 23
18 21.96 temperature 25 10 < th dose dependent rect. 21 23
20 21.97 temperature 25 10 < th dose dependent rect. 7 23
21 21.97 temperature 25 10 < th dose dependent rect. 17 23
22 21.98 temperature 25 10 < th dose dependent no NA NA
23 21.98 humidity 70 43200 < th dose dependent rect. 23 8
26 21.98 temperature 25 10 < th dose dependent rect. 15 23
28 21.99 temperature 15 14400 > th dose independent rect. 16 1
30 21.99 humidity 90 720 > th dose dependent rect. 8 14
36 22.00 humidity 80 1440 > th dose dependent rect. 11 1
37 22.00 humidity 60 43200 < th dose dependent rect. 22 10
39 22.00 temperature 25 30 < th dose dependent rect. 19 23
40 22.00 temperature 25 10 < th dose dependent rect. 23 23
43 22.01 temperature 10 43200 > th dose independent rect. 8 9
45 22.01 temperature 25 30 < th dose dependent rect. 11 23
47 22.02 humidity 60 43200 < th dose dependent rect. 5 3
48 22.02 humidity 60 43200 < th dose dependent rect. 2 6
54 22.03 temperature 15 4320 > th dose independent rect. 10 5
55 22.03 humidity 60 43200 > th dose independent rect. 23 8
61 22.03 temperature 25 30 < th dose dependent rect. 13 23
64 22.04 temperature 25 30 < th dose dependent rect. 3 23
66 22.05 temperature 15 4320 > th dose independent rect. 13 2
70 22.06 humidity 60 43200 < th dose independent rect. 22 9
74 22.08 humidity 90 720 > th dose dependent rect. 7 16
102 22.17 radiation 1 1440 < th dose independent rect. 10 1
106 22.17 temperature 15 14400 < th dose dependent rect. 20 1
108 22.17 radiation 1 1440 < th dose dependent rect. 10 1
111 22.18 temperature 10 43200 > th dose independent rect. 23 1
130 22.21 humidity 90 270 > th dose independent rect. 7 20
135 22.22 temperature 15 14400 < th dose independent rect. 15 1
137 22.22 temperature 10 43200 < th dose independent rect. 21 1
140 22.22 temperature 10 43200 < th dose independent rect. 20 3
141 22.22 humidity 70 43200 > th dose independent rect. 1 3
146 22.22 temperature 10 43200 < th dose independent rect. 9 14
147 22.22 temperature 10 43200 < th dose independent rect. 8 16
152 22.23 radiation 10 4320 > th dose independent rect. 5 1
191 22.23 humidity 50 43200 < th dose independent rect. 19 13
195 22.23 temperature 10 43200 < th dose dependent rect. 8 14
206 22.24 temperature 15 14400 > th dose independent rect. 15 6
218 22.24 temperature 20 30 > th dose independent rect. 4 18
230 22.25 humidity 50 43200 < th dose independent rect. 5 3
231 22.25 humidity 50 43200 < th dose independent rect. 3 5
243 22.25 temperature 15 14400 < th dose dependent rect. 16 1
244 22.25 radiation 10 4320 > th dose dependent rect. 5 1
272 22.26 humidity 60 43200 > th dose independent rect. 3 1
276 22.26 temperature 15 4320 > th dose independent rect. 13 5
291 22.27 humidity 70 43200 < th dose independent rect. 1 2
311 22.28 temperature 15 4320 > th dose independent rect. 2 15
331 22.29 humidity 70 43200 < th dose dependent rect. 1 1
343 22.30 temperature 10 43200 > th dose independent sin 20 NA
344 22.30 wind 9 4320 > th dose independent rect. 9 1
359 22.30 temperature 15 4320 > th dose independent rect. 2 13
376 22.31 temperature 15 4320 > th dose independent sin 1 NA
378 22.31 temperature 10 43200 < th dose independent sin 19 NA
393 22.31 temperature 15 14400 < th dose dependent rect. 12 1
408 22.32 temperature 15 4320 > th dose independent rect. 3 1
422 22.32 temperature 15 720 > th dose independent rect. 20 16
479 22.34 temperature 15 720 > th dose independent rect. 18 17
481 22.34 temperature 25 1440 < th dose dependent rect. 11 1
483 22.34 humidity 50 43200 < th dose dependent rect. 19 15
500 22.35 wind 9 14400 > th dose dependent rect. 19 1
510 22.36 temperature 15 720 > th dose independent sin 9 NA
513 22.36 temperature 15 4320 < th dose independent sin 3 NA
515 22.36 temperature 15 14400 > th dose independent rect. 7 1
525 22.36 temperature 15 4320 < th dose independent rect. 2 12
603 22.38 temperature 15 4320 < th dose independent rect. 2 9
626 22.39 temperature 15 4320 > th dose independent rect. 2 4
678 22.40 humidity 50 43200 > th dose independent rect. 19 13
740 22.41 temperature 10 43200 < th dose dependent rect. 23 1
788 22.42 temperature 15 4320 < th dose independent rect. 6 6
834 22.43 temperature 20 1440 < th dose independent rect. 11 1
842 22.43 temperature 15 4320 < th dose independent rect. 1 6
866 22.43 temperature 15 720 > th dose independent rect. 23 16
871 22.43 temperature 15 720 > th dose independent rect. 18 20
876 22.43 temperature 15 4320 > th dose independent rect. 10 21
915 22.44 humidity 50 43200 < th dose independent rect. 3 1
939 22.44 temperature 15 4320 < th dose independent rect. 6 8
979 22.44 temperature 15 4320 < th dose dependent rect. 10 1
995 22.45 temperature 15 4320 < th dose independent no NA NA
997 22.45 temperature 15 4320 < th dose independent rect. 2 3