Os08g0345100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0345100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.87 | 0.523 | 5.43 | 0.89 | 0.449 | 1.88 | 0.696 | -0.67 | -0.207 | 8.42 | 25 | 717 | -- | -- |
| 124.51 | 0.52 | 5.44 | 0.826 | 0.451 | 1.99 | 0.623 | -- | -0.204 | 8.36 | 24.9 | 717 | -- | -- |
| 124.66 | 0.52 | 5.44 | 0.813 | 0.472 | 1.91 | -- | -0.224 | -0.239 | 9.53 | 24.8 | 553 | -- | -- |
| 124.72 | 0.52 | 5.45 | 0.778 | 0.472 | 1.94 | -- | -- | -0.239 | 9.52 | 24.78 | 559 | -- | -- |
| 133.09 | 0.537 | 5.43 | 0.949 | -- | 2.08 | -- | -0.515 | -0.15 | -- | 26.61 | 680 | -- | -- |
| 179.78 | 0.629 | 5.53 | 0.24 | 0.711 | -- | 0.341 | -- | -0.634 | 9.14 | -- | -- | -- | -- |
| 180.17 | 0.629 | 5.53 | 0.253 | 0.708 | -- | -- | -- | -0.633 | 9.22 | -- | -- | -- | -- |
| 133.38 | 0.538 | 5.44 | 0.843 | -- | 2.12 | -- | -- | -0.16 | -- | 26.44 | 679 | -- | -- |
| 138.55 | 0.548 | 5.48 | -- | 0.533 | 1.62 | -- | -- | -0.376 | 9.69 | 24.9 | 498 | -- | -- |
| 209.27 | 0.676 | 5.55 | 0.25 | -- | -- | -- | -- | -0.63 | -- | -- | -- | -- | -- |
| 181.86 | 0.631 | 5.54 | -- | 0.708 | -- | -- | -- | -0.662 | 9.19 | -- | -- | -- | -- |
| 149.21 | 0.569 | 5.5 | -- | -- | 1.88 | -- | -- | -0.412 | -- | 32.8 | 656 | -- | -- |
| 210.92 | 0.678 | 5.55 | -- | -- | -- | -- | -- | -0.658 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 6 | 120.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 27 | 121.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 38 | 122.16 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 40 | 122.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 46 | 122.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 48 | 122.43 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 90 | 123.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 111 | 123.87 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 125 | 124.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 130 | 124.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 148 | 124.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 172 | 124.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 217 | 125.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 232 | 125.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 238 | 125.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 254 | 125.62 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 259 | 125.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 275 | 125.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 305 | 125.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 339 | 126.18 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 355 | 126.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 371 | 126.30 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 632 | 127.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 633 | 127.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 900 | 127.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |