Os08g0342300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine/threonine-protein kinase BRI1-like 1 precursor (EC 2.7.1.37) (BRASSINOSTEROID INSENSITIVE 1-like protein 1).
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Os08g0342300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine/threonine-protein kinase BRI1-like 1 precursor (EC 2.7.1.37) (BRASSINOSTEROID INSENSITIVE 1-like protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.84 | 0.3 | 8.26 | 2.24 | 0.801 | 0.932 | 0.291 | -0.545 | 0.6 | 22.6 | 26.17 | 14 | -- | -- |
| 41.24 | 0.301 | 8.27 | 2.14 | 0.8 | 0.953 | 0.136 | -- | 0.573 | 22.7 | 25.7 | 14 | -- | -- |
| 41.11 | 0.299 | 8.26 | 2.19 | 0.799 | 0.952 | -- | -0.307 | 0.585 | 22.7 | 25.86 | 13 | -- | -- |
| 41.26 | 0.299 | 8.27 | 2.13 | 0.801 | 0.961 | -- | -- | 0.576 | 22.7 | 25.77 | 13 | -- | -- |
| 74.27 | 0.404 | 8.22 | 2.3 | -- | 1.41 | -- | -0.307 | 0.691 | -- | 27.24 | 6 | -- | -- |
| 55.01 | 0.348 | 8.32 | 1.91 | 0.972 | -- | 0.0754 | -- | 0.37 | 23.3 | -- | -- | -- | -- |
| 55.03 | 0.347 | 8.32 | 1.91 | 0.972 | -- | -- | -- | 0.37 | 23.3 | -- | -- | -- | -- |
| 74.41 | 0.404 | 8.23 | 2.25 | -- | 1.42 | -- | -- | 0.679 | -- | 27.16 | 5 | -- | -- |
| 150.52 | 0.575 | 8.36 | -- | 0.959 | 0.17 | -- | -- | 0.189 | 23.4 | 25.7 | 6 | -- | -- |
| 114.18 | 0.499 | 8.29 | 1.93 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 151 | 0.575 | 8.36 | -- | 0.992 | -- | -- | -- | 0.158 | 23.5 | -- | -- | -- | -- |
| 199.69 | 0.66 | 8.31 | -- | -- | 0.784 | -- | -- | 0.311 | -- | 27.33 | 3 | -- | -- |
| 212.74 | 0.681 | 8.34 | -- | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 3 | 40.23 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 20 | 40.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 21 | 40.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 29 | 41.09 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 31 | 41.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 33 | 41.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 34 | 41.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 35 | 41.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 36 | 41.15 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 38 | 41.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 42 | 41.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 44 | 41.22 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 55 | 41.26 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 60 | 41.28 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 62 | 41.29 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 64 | 41.30 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 66 | 41.31 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 88 | 41.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 164 | 41.65 | temperature | 25 | 720 | > th | dose independent | rect. | 9 | 15 |
| 202 | 41.74 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 217 | 41.78 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 4 | NA |
| 261 | 41.86 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 5 | NA |
| 276 | 41.87 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 310 | 41.92 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 331 | 41.95 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 16 |
| 470 | 42.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 474 | 42.11 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 532 | 42.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 648 | 42.23 | atmosphere | 1005 | 43200 | < th | dose independent | no | NA | NA |
| 659 | 42.23 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 738 | 42.28 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 796 | 42.31 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 6 | 16 |
| 812 | 42.32 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 21 | NA |
| 819 | 42.32 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 7 | 14 |
| 862 | 42.33 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 866 | 42.33 | atmosphere | 1010 | 43200 | < th | dose dependent | no | NA | NA |
| 870 | 42.33 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 903 | 42.33 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 19 | 21 |
| 913 | 42.33 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 932 | 42.34 | atmosphere | 1005 | 43200 | > th | dose independent | no | NA | NA |
| 941 | 42.34 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 974 | 42.34 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 23 | 18 |
| 978 | 42.34 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 14 | 19 |
| 979 | 42.34 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 21 | 19 |
| 984 | 42.34 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 12 | 20 |