Os08g0337100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0337100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.81 | 0.335 | 8.03 | 1.12 | 0.158 | -0.883 | -0.591 | -0.284 | -0.0958 | 0.475 | 22.63 | 731 | -- | -- |
| 50.89 | 0.332 | 8.03 | 1.09 | 0.164 | -0.836 | -0.542 | -- | -0.0974 | 0.495 | 22.61 | 723 | -- | -- |
| 52.16 | 0.336 | 8.03 | 1.1 | 0.159 | -0.85 | -- | 0.0292 | -0.0976 | 0.566 | 22.53 | 734 | -- | -- |
| 52.16 | 0.336 | 8.03 | 1.1 | 0.16 | -0.855 | -- | -- | -0.0995 | 0.544 | 22.55 | 734 | -- | -- |
| 53.59 | 0.341 | 8.03 | 1.09 | -- | -0.949 | -- | -0.048 | -0.108 | -- | 22.54 | 843 | -- | -- |
| 59.15 | 0.361 | 8.01 | 1.3 | 0.236 | -- | -0.597 | -- | 0.0224 | 24 | -- | -- | -- | -- |
| 60.69 | 0.365 | 8 | 1.32 | 0.239 | -- | -- | -- | 0.0253 | 23.8 | -- | -- | -- | -- |
| 53.59 | 0.341 | 8.03 | 1.08 | -- | -0.931 | -- | -- | -0.111 | -- | 22.6 | 844 | -- | -- |
| 60.5 | 0.362 | 8.1 | -- | 0.223 | -1.12 | -- | -- | -0.396 | 23.7 | 22.4 | 47520 | -- | -- |
| 64.28 | 0.375 | 8 | 1.33 | -- | -- | -- | -- | 0.0283 | -- | -- | -- | -- | -- |
| 106.76 | 0.483 | 8.04 | -- | 0.256 | -- | -- | -- | -0.122 | 0.0927 | -- | -- | -- | -- |
| 63.61 | 0.371 | 8.1 | -- | -- | -1.13 | -- | -- | -0.399 | -- | 22.5 | 47520 | -- | -- |
| 110.88 | 0.492 | 8.03 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 5 | 49.06 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 10 | 49.31 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 12 | 49.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 24 | 49.67 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 31 | 49.78 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 32 | 49.80 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 37 | 49.89 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 38 | 49.90 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 45 | 49.98 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 50 | 50.04 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 58 | 50.11 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 61 | 50.13 | wind | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 72 | 50.23 | wind | 1 | 43200 | > th | dose independent | sin | 7 | NA |
| 75 | 50.28 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 83 | 50.36 | wind | 1 | 43200 | < th | dose dependent | sin | 6 | NA |
| 104 | 50.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 139 | 50.70 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 163 | 50.84 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 20 |
| 176 | 50.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 18 |
| 177 | 50.91 | temperature | 20 | 720 | < th | dose dependent | rect. | 11 | 18 |
| 195 | 50.95 | temperature | 20 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 240 | 51.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 250 | 51.15 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 309 | 51.31 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 328 | 51.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 330 | 51.34 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 337 | 51.34 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 19 |
| 341 | 51.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 353 | 51.37 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 355 | 51.37 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 357 | 51.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 378 | 51.40 | temperature | 20 | 720 | < th | dose dependent | sin | 14 | NA |
| 415 | 51.45 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 474 | 51.54 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 482 | 51.56 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 492 | 51.57 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 726 | 51.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 819 | 51.95 | wind | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 824 | 51.95 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 843 | 51.97 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 22 |
| 851 | 51.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 853 | 51.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 862 | 51.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 1 | NA |
| 875 | 52.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 9 |
| 888 | 52.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 938 | 52.04 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 969 | 52.06 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 20 |
| 974 | 52.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 15 |