Os08g0334900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xyloglucan fucosyltransferase family protein.
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Os08g0334900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xyloglucan fucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 504.75 | 1.06 | 3.73 | 0.958 | 0.974 | 0.9 | 0.0159 | 4.13 | 0.517 | 23.6 | 50.67 | 6248 | -- | -- |
| 518.46 | 1.06 | 3.74 | 0.894 | 1.02 | 2.13 | -0.079 | -- | 0.628 | 23.8 | 46 | 5752 | -- | -- |
| 504.75 | 1.05 | 3.73 | 0.957 | 0.974 | 0.9 | -- | 4.13 | 0.517 | 23.6 | 50.67 | 6248 | -- | -- |
| 515.72 | 1.06 | 3.82 | 0.898 | 1.04 | 2.23 | -- | -- | 0.503 | 23.6 | 45.46 | 6195 | -- | -- |
| 564.24 | 1.11 | 3.71 | 0.957 | -- | 0.978 | -- | 4.12 | 0.535 | -- | 50.08 | 6288 | -- | -- |
| 584.01 | 1.13 | 3.83 | 1.51 | 1.01 | -- | 0.139 | -- | 0.407 | 23.6 | -- | -- | -- | -- |
| 584.09 | 1.13 | 3.83 | 1.51 | 1.01 | -- | -- | -- | 0.406 | 23.6 | -- | -- | -- | -- |
| 574.41 | 1.12 | 3.81 | 0.984 | -- | 2.78 | -- | -- | 0.524 | -- | 47.71 | 4971 | -- | -- |
| 531.64 | 1.07 | 3.82 | -- | 1.01 | 2.53 | -- | -- | 0.439 | 23.7 | 45 | 6176 | -- | -- |
| 647.93 | 1.19 | 3.81 | 1.53 | -- | -- | -- | -- | 0.418 | -- | -- | -- | -- | -- |
| 643.92 | 1.19 | 3.87 | -- | 1.03 | -- | -- | -- | 0.239 | 23.7 | -- | -- | -- | -- |
| 583.5 | 1.13 | 3.79 | -- | -- | 3.58 | -- | -- | 0.507 | -- | 48.22 | 4956 | -- | -- |
| 710.07 | 1.24 | 3.85 | -- | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 458.50 | radiation | 30 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 2 | 458.73 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 3 | 459.22 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 5 | 459.58 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 10 | 460.79 | radiation | 1 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 18 | 461.85 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 36 | 463.03 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 41 | 463.16 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 45 | 463.33 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 48 | 463.34 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 90 | 463.55 | radiation | 30 | 43200 | < th | dose independent | sin | 20 | NA |
| 100 | 463.62 | radiation | 30 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 102 | 463.62 | radiation | 30 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 147 | 463.78 | radiation | 30 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 169 | 463.80 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 208 | 463.91 | radiation | 30 | 43200 | < th | dose independent | rect. | 4 | 19 |
| 213 | 463.92 | radiation | 30 | 43200 | < th | dose independent | no | NA | NA |
| 269 | 463.92 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 22 |
| 327 | 464.06 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 345 | 464.11 | radiation | 10 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 346 | 464.11 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 351 | 464.14 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 387 | 464.25 | radiation | 1 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 388 | 464.26 | radiation | 1 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 420 | 464.35 | radiation | 10 | 43200 | < th | dose independent | sin | 23 | NA |
| 475 | 464.46 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 524 | 464.59 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 22 |
| 529 | 464.60 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 589 | 464.68 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 591 | 464.69 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 599 | 464.71 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 21 |
| 628 | 464.80 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 16 |
| 641 | 464.83 | radiation | 1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 693 | 464.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 816 | 465.10 | radiation | 40 | 43200 | < th | dose dependent | sin | 21 | NA |
| 865 | 465.21 | radiation | 40 | 43200 | < th | dose dependent | rect. | 16 | 22 |
| 905 | 465.27 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 975 | 465.34 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 16 |