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Os08g0327100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0201) R2 : 0.65
β1 : -0.955 (0.0735) R2dD : 0.135 R2D : 0.152
β2 : 1.27 (0.0506) R2dC : 0.488 R2C : 0.48
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.182 (0.0428) R2dN8 : 0.0186 R2N8 : 0.026
σ : 0.377
deviance : 64.97
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_____
C
peak time of C : 20.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.76 0.351 10.3 -0.443 1.28 0.184 -0.0548 -1.28 0.381 20.2 23.9 110 -- --
63.16 0.373 10.3 -0.895 1.26 0.156 -0.179 -- 0.246 20.3 23.45 17 -- --
55.77 0.348 10.3 -0.442 1.28 0.184 -- -1.28 0.381 20.2 23.87 109 -- --
63.24 0.37 10.3 -0.888 1.26 0.157 -- -- 0.247 20.2 23.45 17 -- --
143.97 0.562 10.3 -0.542 -- 0.281 -- -0.972 0.367 -- 23.5 17 -- --
64.86 0.378 10.4 -0.961 1.27 -- -0.18 -- 0.182 20.4 -- -- -- --
64.97 0.377 10.4 -0.955 1.27 -- -- -- 0.182 20.4 -- -- -- --
145.24 0.564 10.3 -0.853 -- 0.381 -- -- 0.279 -- 22.3 10 -- --
82.72 0.424 10.3 -- 1.24 0.294 -- -- 0.4 20 23.22 13 -- --
154.85 0.581 10.3 -0.962 -- -- -- -- 0.169 -- -- -- -- --
89.01 0.441 10.3 -- 1.27 -- -- -- 0.288 20.3 -- -- -- --
163.32 0.597 10.3 -- -- 0.478 -- -- 0.406 -- 22.4 10 -- --
179.26 0.625 10.3 -- -- -- -- -- 0.276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.31 wind 1.0 43200 > th dose independent rect. 8 4
3 52.77 wind 1.0 43200 < th dose independent rect. 8 4
4 52.92 wind 1.0 43200 < th dose dependent rect. 11 1
5 53.11 humidity 90.0 43200 < th dose dependent rect. 4 1
9 53.25 wind 1.0 43200 < th dose dependent rect. 8 18
10 53.32 wind 1.0 43200 < th dose independent rect. 11 1
13 53.41 wind 1.0 43200 < th dose dependent rect. 8 4
14 53.42 humidity 50.0 43200 < th dose independent rect. 14 1
15 53.46 wind 1.0 43200 > th dose independent rect. 11 1
35 53.84 wind 1.0 43200 > th dose dependent rect. 15 2
37 53.86 wind 9.0 43200 < th dose dependent rect. 15 2
41 53.90 humidity 50.0 43200 > th dose independent rect. 12 1
42 53.90 humidity 60.0 43200 < th dose independent rect. 9 1
49 53.97 humidity 50.0 43200 > th dose independent rect. 14 1
52 53.99 humidity 50.0 43200 > th dose independent rect. 12 3
54 54.00 humidity 80.0 43200 > th dose independent rect. 19 12
62 54.06 humidity 80.0 43200 < th dose independent rect. 19 14
63 54.06 wind 5.0 43200 < th dose dependent rect. 11 6
69 54.08 humidity 80.0 43200 < th dose independent rect. 3 6
71 54.10 wind 1.0 43200 > th dose independent rect. 24 1
72 54.10 humidity 60.0 43200 > th dose independent rect. 9 1
77 54.12 humidity 80.0 43200 < th dose independent sin 9 NA
80 54.13 wind 3.0 43200 > th dose independent rect. 11 6
82 54.13 humidity 80.0 43200 < th dose independent rect. 19 11
85 54.14 wind 3.0 43200 < th dose independent rect. 9 8
91 54.15 wind 3.0 43200 > th dose independent rect. 9 8
125 54.27 wind 1.0 43200 > th dose independent rect. 23 3
155 54.33 humidity 80.0 43200 > th dose independent rect. 20 4
165 54.34 wind 1.0 43200 > th dose dependent rect. 12 5
184 54.37 humidity 80.0 43200 > th dose independent rect. 19 7
209 54.41 atmosphere 1015.0 43200 < th dose independent rect. 9 2
215 54.42 temperature 15.0 10 > th dose dependent rect. 20 22
216 54.43 humidity 80.0 43200 > th dose independent sin 10 NA
218 54.43 atmosphere 1015.0 43200 > th dose independent rect. 9 1
221 54.43 wind 1.0 43200 > th dose independent rect. 8 20
263 54.48 wind 1.0 43200 < th dose independent rect. 8 20
274 54.50 humidity 80.0 43200 < th dose dependent rect. 19 11
275 54.51 humidity 80.0 43200 > th dose independent rect. 3 6
327 54.58 wind 1.0 43200 < th dose dependent sin 17 NA
337 54.60 humidity 80.0 43200 < th dose independent rect. 5 1
342 54.60 wind 3.0 43200 > th dose independent rect. 6 13
351 54.62 wind 3.0 43200 < th dose independent sin 23 NA
353 54.62 precipitation 0.1 43200 > th dose independent rect. 23 1
354 54.62 precipitation 0.1 43200 < th dose independent rect. 23 1
358 54.62 precipitation 0.1 43200 > th dose dependent rect. 23 1
359 54.62 precipitation 0.1 43200 < th dose dependent rect. 23 1
370 54.64 wind 3.0 43200 > th dose independent sin 22 NA
373 54.64 wind 3.0 43200 < th dose independent rect. 6 13
461 54.76 wind 1.0 43200 < th dose independent rect. 24 1
467 54.76 wind 5.0 43200 < th dose dependent sin 22 NA
472 54.77 wind 3.0 43200 > th dose independent rect. 16 1
505 54.79 wind 1.0 43200 < th dose dependent rect. 8 14
535 54.82 wind 1.0 43200 < th dose independent rect. 10 18
552 54.85 humidity 80.0 43200 > th dose independent rect. 5 1
553 54.85 wind 1.0 43200 < th dose independent rect. 23 3
558 54.85 humidity 50.0 43200 < th dose independent rect. 16 16
568 54.86 atmosphere 1015.0 43200 > th dose independent rect. 1 1
586 54.88 humidity 80.0 43200 < th dose independent rect. 20 4
600 54.89 wind 1.0 43200 < th dose independent rect. 8 18
631 54.93 wind 1.0 43200 < th dose independent rect. 15 11
635 54.93 humidity 90.0 43200 < th dose dependent rect. 1 8
636 54.93 temperature 30.0 90 < th dose dependent rect. 11 23
640 54.94 wind 1.0 43200 > th dose independent rect. 8 18
667 54.95 radiation 1.0 30 < th dose dependent rect. 21 23
669 54.96 atmosphere 1015.0 43200 < th dose independent rect. 1 1
671 54.96 wind 5.0 43200 < th dose independent rect. 15 2
709 54.99 wind 3.0 43200 < th dose dependent rect. 6 16
710 54.99 humidity 50.0 43200 < th dose dependent rect. 16 17
727 55.01 humidity 80.0 43200 < th dose dependent sin 10 NA
728 55.01 wind 3.0 43200 < th dose dependent rect. 20 1
737 55.03 wind 5.0 43200 < th dose independent rect. 15 4
858 55.12 temperature 20.0 10 > th dose dependent rect. 11 23
875 55.13 wind 3.0 43200 < th dose dependent rect. 24 22
917 55.16 radiation 10.0 43200 > th dose independent rect. 10 1
924 55.16 humidity 50.0 43200 > th dose independent rect. 16 16
941 55.17 wind 3.0 43200 < th dose dependent rect. 4 18
966 55.19 wind 3.0 43200 < th dose dependent rect. 3 22
990 55.21 wind 5.0 43200 < th dose dependent rect. 11 18
992 55.21 wind 3.0 43200 < th dose dependent rect. 19 22