Os08g0326900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0326900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.53 | 0.422 | 7.97 | -0.529 | 2.75 | -1.83 | 1.39 | -2.23 | -0.353 | 14 | 6.332 | 84 | 3.1 | 3.32 |
| 85.6 | 0.431 | 7.97 | -0.343 | 2.78 | -1.98 | 1.83 | -- | -0.342 | 14.1 | 4.116 | 73 | 3.13 | 3.48 |
| 87.29 | 0.435 | 7.97 | -0.476 | 2.75 | -1.86 | -- | -2.38 | -0.328 | 14 | 6.214 | 77 | 3.13 | 3.43 |
| 97.2 | 0.459 | 7.96 | -0.338 | 2.75 | -2.16 | -- | -- | -0.34 | 14 | 3.793 | 73 | 3.12 | 3.47 |
| 429.82 | 0.966 | 7.97 | -0.577 | -- | -2.84 | -- | -2.41 | -0.311 | -- | 17.54 | 55 | 2.37 | 4.3 |
| 171.56 | 0.614 | 7.98 | -0.543 | 3.53 | -- | 2.52 | -- | -0.32 | 14.9 | -- | -- | -- | -- |
| 193 | 0.651 | 7.97 | -0.486 | 3.53 | -- | -- | -- | -0.305 | 14.9 | -- | -- | -- | -- |
| 426.86 | 0.962 | 7.93 | -0.0639 | -- | -3.11 | -- | -- | -0.185 | -- | 6.847 | 81 | 1.77 | 4.47 |
| 100.17 | 0.466 | 7.95 | -- | 2.76 | -2.21 | -- | -- | -0.311 | 14 | 3.715 | 73 | 3.13 | 3.47 |
| 913.02 | 1.41 | 7.98 | -0.637 | -- | -- | -- | -- | -0.396 | -- | -- | -- | -- | -- |
| 199.23 | 0.66 | 7.95 | -- | 3.54 | -- | -- | -- | -0.251 | 14.9 | -- | -- | -- | -- |
| 377.89 | 0.905 | 7.93 | -- | -- | -3.02 | -- | -- | -0.158 | -- | 9.869 | 155 | 0.0167 | 5.83 |
| 923.72 | 1.42 | 7.96 | -- | -- | -- | -- | -- | -0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.48 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 3 | 82.85 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 7 | 84.16 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 8 | 84.16 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 9 | 84.26 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 14 | 84.78 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 20 | 85.65 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 23 | 85.97 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 24 | 85.98 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 26 | 85.99 | wind | 7.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 30 | 86.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 36 | 86.49 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 38 | 86.49 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 39 | 86.49 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 42 | 86.49 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 43 | 86.49 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 48 | 86.49 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 56 | 87.16 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 67 | 88.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 68 | 88.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 74 | 88.47 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 75 | 88.49 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 77 | 88.70 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 83 | 88.99 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 95 | 89.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 96 | 89.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 116 | 90.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 118 | 90.08 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 124 | 90.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 126 | 90.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 127 | 90.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 130 | 90.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 131 | 90.12 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 148 | 90.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 153 | 90.94 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 4 |
| 155 | 90.94 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 172 | 91.66 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 225 | 93.60 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 263 | 94.29 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 279 | 94.62 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 282 | 94.73 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 287 | 94.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 289 | 94.84 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 290 | 94.84 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 293 | 94.84 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 294 | 94.84 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 298 | 94.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 344 | 95.73 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 345 | 95.73 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 346 | 95.77 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 359 | 96.08 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 381 | 96.53 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 435 | 97.04 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 492 | 97.60 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 515 | 97.89 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 519 | 97.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 565 | 98.62 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 606 | 99.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 742 | 100.54 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 743 | 100.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 746 | 100.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 750 | 100.54 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 755 | 100.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 756 | 100.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 865 | 101.31 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 975 | 102.18 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 992 | 102.45 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 20 |