Os08g0324800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0324800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.05 | 0.579 | 9.13 | 0.357 | 0.734 | 0.912 | 0.963 | 1.86 | -0.528 | 14 | 70.68 | 6371 | -- | -- |
| 154.09 | 0.578 | 9.14 | 0.3 | 0.719 | 1.11 | 0.914 | -- | -0.651 | 14.1 | 70.77 | 7658 | -- | -- |
| 155.48 | 0.581 | 9.12 | 0.392 | 0.73 | 0.9 | -- | 1.97 | -0.516 | 14.1 | 70.58 | 6327 | -- | -- |
| 157.46 | 0.584 | 9.15 | 0.321 | 0.712 | 1.07 | -- | -- | -0.661 | 14.2 | 72.33 | 7682 | -- | -- |
| 181.15 | 0.63 | 9.08 | 0.167 | -- | 0.557 | -- | 0.797 | -0.383 | -- | 70.58 | 6327 | -- | -- |
| 175.71 | 0.621 | 9.09 | 0.182 | 0.764 | -- | 0.912 | -- | -0.403 | 14.5 | -- | -- | -- | -- |
| 178.67 | 0.626 | 9.09 | 0.206 | 0.767 | -- | -- | -- | -0.398 | 14.6 | -- | -- | -- | -- |
| 180.48 | 0.628 | 9.09 | 0.126 | -- | 0.573 | -- | -- | -0.41 | -- | 72.99 | 7602 | -- | -- |
| 160.23 | 0.59 | 9.15 | -- | 0.724 | 1.04 | -- | -- | -0.678 | 14.2 | 73 | 7665 | -- | -- |
| 213.12 | 0.682 | 9.09 | 0.173 | -- | -- | -- | -- | -0.417 | -- | -- | -- | -- | -- |
| 179.79 | 0.627 | 9.09 | -- | 0.763 | -- | -- | -- | -0.421 | 14.6 | -- | -- | -- | -- |
| 180.9 | 0.628 | 9.09 | -- | -- | 0.575 | -- | -- | -0.424 | -- | 72.99 | 7602 | -- | -- |
| 213.91 | 0.683 | 9.1 | -- | -- | -- | -- | -- | -0.436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 2 | 150.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 3 | 150.80 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 4 | 150.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 13 | 151.11 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 14 | 151.16 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 16 | 151.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 20 | 151.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 25 | 151.72 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 29 | 151.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 30 | 151.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 31 | 151.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 32 | 151.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 40 | 152.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 41 | 152.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 42 | 152.08 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 43 | 152.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 44 | 152.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 45 | 152.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 47 | 152.16 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 59 | 152.27 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 60 | 152.27 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 63 | 152.29 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 70 | 152.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 86 | 152.45 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 88 | 152.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 89 | 152.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 97 | 152.50 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 114 | 152.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 117 | 152.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 124 | 152.60 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 138 | 152.65 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 159 | 152.71 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 10 |
| 171 | 152.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 181 | 152.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 189 | 152.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 194 | 152.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 211 | 152.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 214 | 152.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 219 | 152.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 246 | 152.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 281 | 152.90 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 288 | 152.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 339 | 152.99 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 342 | 152.99 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 486 | 153.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 520 | 153.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 542 | 153.20 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 565 | 153.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 619 | 153.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 629 | 153.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 633 | 153.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 642 | 153.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 661 | 153.34 | humidity | 70.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 686 | 153.36 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 687 | 153.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 12 |
| 711 | 153.39 | humidity | 80.0 | 14400 | < th | dose dependent | no | NA | NA |
| 741 | 153.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 743 | 153.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 748 | 153.43 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 749 | 153.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 751 | 153.43 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 759 | 153.43 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 760 | 153.43 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 783 | 153.46 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 795 | 153.47 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 944 | 153.60 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 952 | 153.61 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 963 | 153.63 | humidity | 70.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 973 | 153.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 999 | 153.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |