Os08g0323800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0323800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.71 | 0.277 | 9.53 | 2.3 | 0.304 | -0.64 | 0.108 | 1.82 | 0.437 | 14.3 | 25.19 | 1351 | -- | -- |
| 35.47 | 0.277 | 9.58 | 1.84 | 0.326 | -0.437 | 0.0722 | -- | 0.395 | 13.9 | 25.31 | 7105 | -- | -- |
| 34.75 | 0.275 | 9.53 | 2.3 | 0.305 | -0.641 | -- | 1.82 | 0.432 | 14.3 | 25.32 | 1351 | -- | -- |
| 35.41 | 0.277 | 9.57 | 1.83 | 0.335 | -0.436 | -- | -- | 0.378 | 14.1 | 25.48 | 7123 | -- | -- |
| 39.08 | 0.291 | 9.52 | 2.33 | -- | -0.777 | -- | 1.97 | 0.461 | -- | 24.76 | 1205 | -- | -- |
| 44.27 | 0.312 | 9.6 | 1.65 | 0.365 | -- | 0.132 | -- | 0.262 | 14.2 | -- | -- | -- | -- |
| 44.33 | 0.312 | 9.6 | 1.66 | 0.365 | -- | -- | -- | 0.263 | 14.2 | -- | -- | -- | -- |
| 41.52 | 0.3 | 9.58 | 1.84 | -- | -0.49 | -- | -- | 0.372 | -- | 25.41 | 6929 | -- | -- |
| 116.12 | 0.502 | 9.63 | -- | 0.302 | -0.121 | -- | -- | 0.105 | 13.2 | 28.7 | 7144 | -- | -- |
| 52.28 | 0.338 | 9.6 | 1.64 | -- | -- | -- | -- | 0.254 | -- | -- | -- | -- | -- |
| 116.62 | 0.505 | 9.64 | -- | 0.334 | -- | -- | -- | 0.0784 | 14.1 | -- | -- | -- | -- |
| 86.66 | 0.434 | 9.71 | -- | -- | 0.965 | -- | -- | -0.221 | -- | 12.17 | 47520 | -- | -- |
| 123.29 | 0.518 | 9.64 | -- | -- | -- | -- | -- | 0.072 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.17 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 34.23 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 5 | 34.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 7 | 34.38 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 13 | 34.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 15 |
| 24 | 34.53 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 27 | 34.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 8 |
| 34 | 34.56 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 58 | 34.59 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 89 | 34.65 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 177 | 34.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 21 |
| 180 | 34.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 190 | 34.80 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 245 | 34.83 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 271 | 34.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 285 | 34.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 287 | 34.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 305 | 34.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 314 | 34.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 344 | 34.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 349 | 34.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 353 | 35.00 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 363 | 35.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 364 | 35.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 371 | 35.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 16 |
| 373 | 35.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 395 | 35.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 437 | 35.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 450 | 35.07 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 465 | 35.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 485 | 35.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 509 | 35.17 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 524 | 35.20 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 525 | 35.20 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 528 | 35.21 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 553 | 35.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 583 | 35.31 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 586 | 35.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 590 | 35.32 | humidity | 90.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 594 | 35.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 21 |
| 603 | 35.33 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 629 | 35.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 633 | 35.37 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 667 | 35.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 672 | 35.39 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 756 | 35.47 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 760 | 35.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 781 | 35.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 817 | 35.52 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 822 | 35.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 833 | 35.53 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 835 | 35.53 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 861 | 35.55 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 879 | 35.56 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 914 | 35.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 926 | 35.60 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 941 | 35.61 | humidity | 80.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 953 | 35.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 973 | 35.63 | humidity | 90.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 974 | 35.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 994 | 35.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 1000 | 35.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 11 |