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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0321400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.84 (0.0186) R2 : 0.0225
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.127 (0.0393) R2dN8 : 0.0291 R2N8 : 0.0225
σ : 0.351
deviance : 56.6
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.35 0.343 2.85 -0.117 0.0186 -0.342 0.17 1.33 0.11 14.1 1 16 -- --
54.82 0.345 2.84 -0.0711 0.00975 -0.251 0.31 -- 0.125 14.4 1.087 16 -- --
53.45 0.341 2.85 -0.114 0.0183 -0.342 -- 1.4 0.11 13.6 1.047 16 -- --
55.15 0.346 2.84 -0.0568 0.00998 -0.242 -- -- 0.125 13.8 1.1 16 -- --
53.47 0.341 2.85 -0.114 -- -0.333 -- 1.4 0.109 -- 1.057 16 -- --
56.13 0.351 2.84 -0.0324 0.0665 -- -0.285 -- 0.121 4.05 -- -- -- --
56.32 0.351 2.84 -0.0288 0.0712 -- -- -- 0.123 5.38 -- -- -- --
55.16 0.346 2.84 -0.0575 -- -0.236 -- -- 0.125 -- 1.088 16 -- --
55.23 0.348 2.83 -- 0.0244 -0.188 -- -- 0.131 8.57 1.1 16 -- --
56.59 0.351 2.84 -0.0264 -- -- -- -- 0.124 -- -- -- -- --
56.34 0.351 2.84 -- 0.0707 -- -- -- 0.126 5.4 -- -- -- --
55.24 0.346 2.84 -- -- -0.228 -- -- 0.131 -- 1.077 16 -- --
56.6 0.351 2.84 -- -- -- -- -- 0.127 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.35 atmosphere 1015.0 30 < th dose independent rect. 3 23
3 48.35 temperature 20.0 30 > th dose dependent rect. 2 1
4 48.35 atmosphere 1005.0 30 > th dose dependent rect. 2 1
5 48.36 temperature 25.0 90 > th dose independent rect. 2 1
6 48.36 wind 3.0 30 < th dose dependent rect. 2 1
10 48.38 wind 3.0 30 < th dose independent rect. 2 1
12 48.38 atmosphere 1005.0 30 > th dose independent rect. 2 1
20 48.39 humidity 80.0 30 > th dose independent rect. 2 1
23 48.39 humidity 80.0 30 > th dose dependent rect. 2 1
26 48.40 temperature 10.0 30 > th dose independent rect. 2 1
28 48.40 temperature 30.0 30 < th dose independent rect. 2 1
29 48.40 humidity 50.0 30 > th dose independent rect. 2 1
32 48.40 atmosphere 995.0 30 > th dose independent rect. 2 1
34 48.40 atmosphere 1010.0 30 < th dose independent rect. 2 1
36 48.40 radiation 1.0 30 < th dose independent rect. 2 1
41 48.40 precipitation 0.1 30 < th dose independent rect. 2 1
42 48.40 temperature 10.0 30 > th dose independent rect. 3 23
43 48.40 humidity 50.0 30 > th dose dependent rect. 2 1
46 48.40 radiation 1.0 30 < th dose dependent rect. 2 1
51 48.40 precipitation 0.1 30 < th dose dependent rect. 2 1
53 48.41 atmosphere 995.0 30 > th dose independent rect. 3 23
56 48.43 atmosphere 1015.0 30 < th dose dependent rect. 2 1
59 48.47 wind 9.0 1440 < th dose independent rect. 3 1
60 48.47 temperature 10.0 1440 > th dose independent rect. 3 1
63 48.47 temperature 30.0 1440 < th dose independent rect. 3 1
67 48.47 humidity 50.0 1440 > th dose independent rect. 3 1
76 48.47 atmosphere 995.0 1440 > th dose independent rect. 3 1
77 48.47 radiation 1.0 1440 < th dose independent rect. 3 1
97 48.47 temperature 10.0 1440 > th dose independent rect. 4 23
100 48.47 radiation 1.0 1440 < th dose dependent rect. 3 1
118 48.48 precipitation 0.1 30 < th dose independent rect. 3 23
119 48.48 temperature 30.0 30 < th dose dependent rect. 2 1
122 48.48 precipitation 0.1 30 < th dose dependent rect. 3 23
128 48.52 wind 1.0 30 > th dose independent rect. 2 1
180 49.05 wind 9.0 30 < th dose independent rect. 3 23
193 50.22 humidity 50.0 30 > th dose independent rect. 3 23
216 51.29 temperature 30.0 30 < th dose independent rect. 3 23
263 52.05 wind 1.0 10 > th dose independent rect. 11 23
281 52.33 wind 1.0 10 < th dose independent rect. 17 10
290 52.44 humidity 90.0 90 < th dose independent rect. 2 1
309 52.74 atmosphere 1015.0 720 < th dose independent rect. 3 20
311 52.76 wind 1.0 30 < th dose independent rect. 10 1
312 52.76 temperature 10.0 1440 > th dose independent rect. 11 1
316 52.76 atmosphere 995.0 1440 > th dose independent rect. 11 1
319 52.76 precipitation 0.1 1440 < th dose independent rect. 11 1
320 52.76 temperature 10.0 1440 > th dose independent rect. 12 23
323 52.76 wind 1.0 30 < th dose dependent rect. 10 1
324 52.76 precipitation 0.1 1440 < th dose dependent rect. 11 1
334 52.80 wind 1.0 10 > th dose independent rect. 21 23
348 52.88 wind 1.0 30 > th dose independent rect. 3 23
350 52.91 atmosphere 1005.0 30 > th dose dependent rect. 10 1
351 52.92 temperature 30.0 30 < th dose independent rect. 10 1
352 52.92 humidity 70.0 30 < th dose independent rect. 10 1
379 52.95 atmosphere 1015.0 30 < th dose independent rect. 11 23
380 52.95 temperature 25.0 30 > th dose dependent rect. 10 1
382 52.96 temperature 25.0 30 > th dose independent rect. 10 1
385 52.96 humidity 80.0 30 < th dose dependent rect. 10 1
395 53.00 atmosphere 1005.0 30 > th dose independent rect. 10 1
398 53.01 radiation 20.0 30 > th dose independent rect. 10 1
401 53.01 atmosphere 1005.0 270 > th dose dependent rect. 23 4
404 53.03 atmosphere 1010.0 30 < th dose independent rect. 10 1
407 53.03 wind 9.0 30 < th dose dependent rect. 10 1
409 53.04 wind 1.0 10 > th dose independent sin 15 NA
410 53.04 wind 5.0 30 < th dose independent rect. 10 1
413 53.04 temperature 10.0 30 > th dose independent rect. 10 1
415 53.04 humidity 50.0 30 > th dose independent rect. 10 1
420 53.04 radiation 1.0 30 > th dose independent rect. 10 1
422 53.04 precipitation 0.1 30 < th dose independent rect. 10 1
424 53.04 temperature 10.0 30 > th dose independent rect. 11 23
425 53.04 wind 5.0 30 < th dose dependent rect. 10 1
427 53.04 precipitation 0.1 30 < th dose dependent rect. 10 1
429 53.05 wind 1.0 30 > th dose independent rect. 10 1
430 53.05 radiation 40.0 30 < th dose independent rect. 10 1
435 53.06 atmosphere 1015.0 90 < th dose independent rect. 21 12
439 53.07 radiation 1.0 30 > th dose dependent rect. 10 1
445 53.09 temperature 25.0 270 > th dose independent rect. 23 4
458 53.16 atmosphere 1015.0 720 < th dose independent rect. 11 12
461 53.18 atmosphere 1015.0 1440 < th dose independent rect. 3 1
462 53.18 radiation 40.0 30 < th dose dependent rect. 10 1
464 53.19 atmosphere 1015.0 720 < th dose independent rect. 21 2
473 53.20 radiation 20.0 30 < th dose dependent rect. 3 23
485 53.23 wind 1.0 30 > th dose dependent rect. 2 1
490 53.26 atmosphere 1015.0 10 < th dose independent rect. 14 12
491 53.26 wind 1.0 30 > th dose dependent rect. 10 1
492 53.26 atmosphere 1015.0 30 < th dose dependent rect. 10 1
495 53.28 atmosphere 1015.0 720 < th dose independent rect. 13 10
496 53.29 humidity 50.0 30 > th dose dependent rect. 10 1
509 53.35 wind 1.0 10 > th dose independent rect. 21 12
515 53.38 temperature 25.0 270 > th dose dependent rect. 23 4
523 53.43 radiation 10.0 30 < th dose independent rect. 3 23
540 53.52 atmosphere 1015.0 720 < th dose independent rect. 11 14
545 53.53 wind 9.0 30 < th dose independent rect. 11 23
548 53.54 atmosphere 1015.0 10 < th dose independent rect. 21 23
566 53.59 wind 3.0 30 < th dose dependent rect. 10 17
604 53.71 temperature 10.0 30 > th dose dependent rect. 3 23
605 53.72 atmosphere 1015.0 10 < th dose independent rect. 12 14
622 53.75 temperature 30.0 90 > th dose dependent rect. 8 1
641 53.76 atmosphere 1015.0 720 < th dose independent rect. 17 6
643 53.76 atmosphere 1000.0 90 > th dose dependent rect. 19 8
668 53.81 wind 1.0 10 > th dose independent no NA NA
672 53.82 wind 9.0 720 < th dose independent rect. 15 12
674 53.82 atmosphere 1000.0 10 > th dose dependent rect. 19 9
679 53.85 temperature 30.0 720 < th dose independent rect. 3 6
682 53.86 wind 9.0 720 < th dose independent rect. 3 12
683 53.86 wind 1.0 10 > th dose independent rect. 14 19
688 53.87 wind 1.0 30 < th dose dependent rect. 21 6
707 53.90 precipitation 0.1 720 < th dose independent rect. 3 12
709 53.90 precipitation 0.1 720 < th dose dependent rect. 3 12
713 53.91 atmosphere 1015.0 10 < th dose independent rect. 16 10
714 53.91 temperature 10.0 720 > th dose independent rect. 3 12
715 53.91 temperature 10.0 720 > th dose independent rect. 15 12
723 53.92 atmosphere 1015.0 720 < th dose independent rect. 7 16
743 53.93 atmosphere 995.0 720 > th dose independent rect. 3 12
756 53.94 humidity 80.0 4320 < th dose dependent rect. 3 1
759 53.95 atmosphere 1015.0 720 < th dose independent rect. 3 12
760 53.95 wind 1.0 10 > th dose independent rect. 16 17
768 53.96 atmosphere 995.0 90 > th dose dependent rect. 17 10
775 53.98 temperature 30.0 90 > th dose independent rect. 8 1
795 53.98 wind 3.0 30 < th dose dependent rect. 2 9
802 54.00 wind 1.0 10 > th dose independent rect. 24 9
804 54.00 temperature 25.0 10 > th dose independent rect. 22 11
815 54.01 humidity 50.0 720 > th dose independent rect. 3 12
823 54.02 atmosphere 995.0 30 > th dose independent rect. 11 23
827 54.02 humidity 50.0 30 > th dose dependent rect. 3 23
843 54.05 humidity 80.0 4320 < th dose independent rect. 3 1
855 54.06 humidity 50.0 720 > th dose independent rect. 21 18
888 54.09 atmosphere 995.0 90 > th dose dependent rect. 15 12
917 54.11 wind 9.0 720 < th dose independent rect. 15 6
920 54.11 wind 1.0 10 > th dose independent rect. 18 15
926 54.12 atmosphere 1010.0 720 < th dose independent rect. 13 2
928 54.12 atmosphere 1010.0 720 < th dose independent rect. 11 4
929 54.12 temperature 30.0 90 < th dose independent rect. 3 6
932 54.12 precipitation 0.1 30 < th dose independent rect. 11 23
938 54.12 precipitation 0.1 30 < th dose dependent rect. 11 23
939 54.13 wind 1.0 10 < th dose independent sin 16 NA
949 54.13 atmosphere 1000.0 10 > th dose dependent rect. 17 11
960 54.14 wind 1.0 10 > th dose independent rect. 14 17
965 54.14 radiation 40.0 90 < th dose dependent rect. 13 14
967 54.14 wind 9.0 30 < th dose dependent rect. 3 23
973 54.15 atmosphere 995.0 90 > th dose dependent rect. 3 6
976 54.16 wind 9.0 720 < th dose independent rect. 3 6
977 54.16 temperature 10.0 720 > th dose independent rect. 3 6
978 54.16 humidity 70.0 90 > th dose independent rect. 3 6
979 54.16 humidity 50.0 720 > th dose independent rect. 3 6
980 54.16 atmosphere 995.0 720 > th dose independent rect. 3 6
981 54.16 radiation 30.0 90 < th dose independent rect. 3 6
985 54.16 temperature 10.0 720 > th dose independent rect. 9 18
994 54.17 temperature 10.0 720 > th dose independent rect. 15 6
999 54.17 temperature 10.0 720 > th dose independent rect. 21 18
1000 54.17 atmosphere 995.0 720 > th dose independent rect. 21 18