Os08g0320200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetrapeptide transporter, OPT1/isp4 family protein.
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Os08g0320200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetrapeptide transporter, OPT1/isp4 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.96 | 0.653 | 3.27 | -0.387 | 0.278 | 0.456 | -0.0571 | 0.851 | 0.046 | 9.84 | 23 | 916 | -- | -- |
| 194.28 | 0.649 | 3.23 | -0.0764 | 0.267 | 0.472 | 0.198 | -- | 0.15 | 10.2 | 23.59 | 904 | -- | -- |
| 192.97 | 0.647 | 3.27 | -0.386 | 0.279 | 0.457 | -- | 0.838 | 0.0469 | 9.87 | 23 | 915 | -- | -- |
| 194.38 | 0.649 | 3.23 | -0.0711 | 0.27 | 0.487 | -- | -- | 0.158 | 9.84 | 23.5 | 925 | -- | -- |
| 197.29 | 0.654 | 3.26 | -0.329 | -- | 0.519 | -- | 0.74 | 0.0939 | -- | 23.4 | 851 | -- | -- |
| 205.71 | 0.672 | 3.28 | -0.267 | 0.364 | -- | 0.24 | -- | -0.0635 | 10.4 | -- | -- | -- | -- |
| 205.94 | 0.672 | 3.28 | -0.257 | 0.364 | -- | -- | -- | -0.0631 | 10.3 | -- | -- | -- | -- |
| 198.42 | 0.656 | 3.23 | -0.0453 | -- | 0.549 | -- | -- | 0.185 | -- | 23.74 | 874 | -- | -- |
| 194.5 | 0.65 | 3.23 | -- | 0.27 | 0.498 | -- | -- | 0.168 | 9.8 | 23.6 | 925 | -- | -- |
| 213.99 | 0.684 | 3.29 | -0.263 | -- | -- | -- | -- | -0.0641 | -- | -- | -- | -- | -- |
| 207.69 | 0.674 | 3.27 | -- | 0.365 | -- | -- | -- | -0.0344 | 10.3 | -- | -- | -- | -- |
| 198.47 | 0.656 | 3.23 | -- | -- | 0.557 | -- | -- | 0.191 | -- | 23.78 | 872 | -- | -- |
| 215.81 | 0.686 | 3.28 | -- | -- | -- | -- | -- | -0.0349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.30 | wind | 7 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 2 | 193.24 | wind | 7 | 90 | > th | dose independent | rect. | 23 | 2 |
| 3 | 193.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 194.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 15 | 194.39 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 19 |
| 25 | 194.61 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 8 |
| 26 | 194.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 29 | 194.66 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 31 | 194.66 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 34 | 194.66 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 44 | 194.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 46 | 194.75 | radiation | 1 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 59 | 194.90 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 81 | 194.94 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 9 |
| 82 | 194.94 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 98 | 195.04 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 17 |
| 119 | 195.12 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 12 |
| 129 | 195.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 139 | 195.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 152 | 195.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 171 | 195.26 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 12 |
| 173 | 195.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 231 | 195.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 248 | 195.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 269 | 195.39 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 281 | 195.40 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 282 | 195.40 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 4 |
| 285 | 195.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 8 |
| 309 | 195.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 312 | 195.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 324 | 195.45 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 356 | 195.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 487 | 195.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 540 | 195.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 603 | 195.68 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 832 | 195.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 902 | 195.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 22 |
| 948 | 195.92 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 985 | 195.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |