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Os08g0313600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0119) R2 : 0.784
β1 : -1.36 (0.0436) R2dD : 0.476 R2D : 0.391
β2 : 0.808 (0.0309) R2dC : 0.327 R2C : 0.292
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.293 (0.0254) R2dN8 : 0.0843 R2N8 : -0.00955
σ : 0.224
deviance : 22.82
__
_____
C
peak time of C : 6.97
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.25 0.211 10.4 -1.17 0.809 -0.657 0.193 0.85 -0.34 6.89 49.86 4452 -- --
20.68 0.212 10.4 -1.25 0.802 -0.378 0.236 -- -0.316 6.9 49.57 3037 -- --
20.35 0.21 10.4 -1.17 0.809 -0.656 -- 0.843 -0.34 6.87 49.66 4454 -- --
20.72 0.212 10.4 -1.24 0.8 -0.41 -- -- -0.327 6.89 49.97 4488 -- --
54.46 0.344 10.5 -1.17 -- -0.532 -- 0.45 -0.322 -- 49.53 3610 -- --
22.71 0.223 10.4 -1.36 0.807 -- 0.208 -- -0.292 6.99 -- -- -- --
22.82 0.224 10.4 -1.36 0.808 -- -- -- -0.293 6.97 -- -- -- --
54.57 0.344 10.5 -1.21 -- -0.399 -- -- -0.314 -- 49.08 3483 -- --
54.35 0.343 10.4 -- 0.715 -0.655 -- -- -0.234 6.98 49 4376 -- --
57.14 0.353 10.5 -1.34 -- -- -- -- -0.278 -- -- -- -- --
71.26 0.395 10.4 -- 0.793 -- -- -- -0.142 7.08 -- -- -- --
74.28 0.401 10.4 -- -- -0.942 -- -- -0.104 -- 71 646 -- --
104.44 0.477 10.4 -- -- -- -- -- -0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.74 humidity 60.0 270 > th dose independent rect. 3 18
6 19.07 humidity 60.0 270 > th dose independent rect. 17 14
14 19.26 temperature 15.0 270 > th dose independent rect. 1 23
16 19.28 temperature 15.0 270 > th dose independent rect. 3 19
19 19.32 humidity 50.0 270 > th dose independent rect. 12 10
20 19.32 temperature 15.0 270 > th dose independent rect. 17 14
23 19.37 temperature 15.0 270 > th dose independent rect. 2 21
26 19.40 temperature 30.0 270 < th dose independent rect. 17 14
32 19.46 humidity 50.0 270 > th dose dependent rect. 3 19
49 19.63 atmosphere 995.0 270 > th dose dependent rect. 22 5
61 19.71 radiation 10.0 270 < th dose independent rect. 15 17
62 19.71 radiation 20.0 270 < th dose dependent rect. 15 17
72 19.76 humidity 80.0 270 > th dose independent rect. 22 5
73 19.76 atmosphere 1000.0 270 > th dose independent rect. 22 5
85 19.80 wind 3.0 1440 < th dose dependent rect. 24 3
91 19.81 radiation 10.0 270 < th dose independent rect. 3 19
93 19.82 radiation 40.0 270 < th dose dependent rect. 3 19
94 19.83 temperature 30.0 270 < th dose independent rect. 12 10
97 19.83 temperature 15.0 90 > th dose independent rect. 5 18
102 19.84 atmosphere 1015.0 1440 < th dose independent rect. 1 4
109 19.85 humidity 60.0 270 > th dose dependent rect. 22 5
128 19.90 temperature 30.0 90 < th dose independent rect. 5 18
138 19.92 wind 9.0 14400 < th dose independent sin 8 NA
141 19.93 temperature 30.0 270 < th dose independent rect. 3 18
144 19.93 radiation 10.0 270 < th dose dependent rect. 3 19
149 19.95 atmosphere 995.0 270 > th dose dependent rect. 23 3
150 19.96 wind 9.0 14400 > th dose independent sin 8 NA
151 19.96 temperature 15.0 270 > th dose independent rect. 12 10
152 19.96 humidity 60.0 270 > th dose independent rect. 11 22
161 19.97 radiation 40.0 270 < th dose independent rect. 3 19
162 19.97 humidity 90.0 4320 > th dose dependent rect. 2 3
170 19.98 humidity 90.0 4320 > th dose dependent rect. 3 1
182 20.00 wind 9.0 14400 > th dose independent rect. 19 18
189 20.01 humidity 50.0 43200 > th dose independent rect. 1 4
195 20.01 humidity 90.0 720 > th dose dependent rect. 7 10
199 20.02 humidity 50.0 720 > th dose independent rect. 10 14
209 20.03 humidity 90.0 720 > th dose dependent rect. 9 6
228 20.05 humidity 90.0 720 > th dose dependent rect. 8 8
247 20.07 wind 7.0 14400 > th dose dependent sin 7 NA
257 20.08 temperature 15.0 720 > th dose independent rect. 19 20
263 20.09 humidity 90.0 4320 > th dose independent rect. 1 3
277 20.10 temperature 15.0 1440 > th dose independent rect. 7 5
287 20.11 temperature 15.0 1440 > th dose independent rect. 1 5
288 20.11 radiation 20.0 4320 < th dose independent rect. 1 5
290 20.11 humidity 90.0 720 > th dose independent rect. 8 8
310 20.12 temperature 10.0 270 > th dose dependent rect. 22 5
318 20.13 wind 9.0 14400 < th dose independent rect. 19 18
320 20.13 wind 7.0 14400 > th dose dependent rect. 20 17
326 20.14 temperature 15.0 4320 > th dose independent rect. 7 2
327 20.14 humidity 90.0 720 > th dose independent rect. 9 6
328 20.14 atmosphere 1015.0 270 < th dose independent rect. 3 19
332 20.14 humidity 80.0 43200 < th dose dependent rect. 4 1
352 20.16 wind 7.0 270 < th dose independent rect. 22 5
353 20.16 precipitation 0.1 270 < th dose independent rect. 22 5
357 20.16 temperature 10.0 270 > th dose independent rect. 7 10
358 20.16 atmosphere 1015.0 270 < th dose independent rect. 7 10
369 20.16 humidity 70.0 1440 < th dose dependent rect. 10 1
370 20.16 wind 9.0 43200 > th dose dependent rect. 12 2
372 20.16 precipitation 0.1 270 < th dose dependent rect. 22 5
380 20.17 radiation 40.0 43200 < th dose independent rect. 10 1
381 20.17 precipitation 0.1 1440 < th dose independent rect. 6 3
383 20.17 temperature 10.0 270 > th dose independent rect. 22 5
384 20.17 temperature 30.0 270 < th dose independent rect. 22 5
385 20.17 humidity 50.0 270 > th dose independent rect. 22 5
390 20.17 radiation 1.0 270 < th dose independent rect. 22 5
399 20.17 precipitation 0.1 270 < th dose independent rect. 7 10
410 20.17 precipitation 0.1 1440 < th dose dependent rect. 6 3
411 20.17 radiation 1.0 270 < th dose dependent rect. 22 5
417 20.17 precipitation 0.1 270 < th dose dependent rect. 7 10
420 20.18 wind 9.0 270 < th dose independent rect. 17 14
430 20.19 temperature 15.0 1440 > th dose independent rect. 3 1
431 20.19 humidity 90.0 1440 < th dose independent rect. 9 1
432 20.19 humidity 80.0 270 > th dose independent rect. 23 3
435 20.19 humidity 90.0 1440 < th dose independent rect. 7 7
436 20.19 wind 9.0 270 < th dose independent rect. 7 10
442 20.19 wind 1.0 14400 < th dose dependent rect. 19 2
443 20.19 wind 9.0 270 < th dose dependent rect. 22 5
444 20.19 radiation 1.0 90 < th dose dependent rect. 23 7
451 20.20 temperature 15.0 720 > th dose independent rect. 12 19
460 20.21 humidity 90.0 4320 > th dose independent rect. 23 6
465 20.21 atmosphere 1010.0 90 < th dose independent rect. 5 18
473 20.21 humidity 90.0 1440 > th dose dependent rect. 9 1
481 20.22 wind 1.0 270 > th dose independent rect. 22 5
491 20.22 humidity 50.0 270 > th dose dependent rect. 12 10
494 20.23 humidity 90.0 1440 > th dose independent rect. 9 1
504 20.23 wind 9.0 270 < th dose independent rect. 3 19
510 20.23 wind 1.0 43200 < th dose dependent rect. 2 1
517 20.23 humidity 50.0 10 > th dose dependent rect. 6 18
527 20.24 radiation 40.0 270 < th dose dependent rect. 13 9
532 20.25 radiation 40.0 43200 > th dose independent rect. 10 1
533 20.25 humidity 70.0 1440 < th dose independent rect. 9 2
538 20.25 radiation 1.0 90 < th dose independent rect. 23 7
544 20.25 atmosphere 1000.0 270 > th dose independent rect. 7 20
555 20.25 radiation 1.0 90 < th dose dependent rect. 23 12
560 20.26 humidity 50.0 43200 > th dose independent rect. 3 1
561 20.26 precipitation 0.1 1440 > th dose independent rect. 2 1
574 20.26 precipitation 0.1 1440 > th dose dependent rect. 2 1
590 20.27 temperature 15.0 1440 > th dose independent rect. 23 7
599 20.27 humidity 70.0 270 > th dose dependent rect. 23 3
662 20.31 wind 9.0 43200 > th dose independent rect. 12 2
665 20.31 atmosphere 995.0 270 > th dose independent rect. 7 10
683 20.32 wind 3.0 720 < th dose independent rect. 24 1
686 20.32 temperature 15.0 1440 > th dose independent rect. 14 16
700 20.32 humidity 50.0 4320 < th dose independent rect. 16 23
714 20.33 humidity 70.0 1440 > th dose independent rect. 9 2
718 20.33 radiation 30.0 270 < th dose independent rect. 3 7
769 20.35 precipitation 0.1 1440 < th dose independent rect. 2 1
772 20.35 temperature 15.0 720 > th dose independent rect. 10 5
776 20.35 radiation 40.0 270 < th dose independent rect. 12 10
789 20.35 precipitation 0.1 1440 < th dose dependent rect. 2 1
804 20.36 precipitation 0.1 1440 < th dose independent rect. 5 7
810 20.36 temperature 15.0 1440 > th dose independent rect. 1 19
823 20.36 precipitation 0.1 1440 < th dose dependent rect. 5 7
828 20.37 humidity 50.0 4320 < th dose independent rect. 11 6
839 20.37 humidity 50.0 4320 < th dose dependent sin 11 NA
854 20.38 wind 1.0 270 > th dose independent rect. 3 4
879 20.38 precipitation 0.1 270 < th dose independent rect. 3 19
885 20.38 temperature 30.0 90 < th dose independent rect. 12 23
894 20.38 precipitation 0.1 270 < th dose dependent rect. 3 19
897 20.39 wind 3.0 270 < th dose independent rect. 23 3
902 20.39 wind 9.0 43200 > th dose independent rect. 3 11
910 20.39 humidity 50.0 4320 < th dose independent rect. 14 21
912 20.39 humidity 50.0 4320 < th dose independent rect. 13 23
926 20.40 humidity 50.0 4320 < th dose independent sin 16 NA
931 20.40 humidity 70.0 10 > th dose independent rect. 17 7
936 20.40 humidity 70.0 30 > th dose independent rect. 15 9
938 20.40 radiation 20.0 270 < th dose independent rect. 13 9
944 20.40 radiation 1.0 90 < th dose independent rect. 23 12
947 20.40 temperature 15.0 720 > th dose independent rect. 10 14
960 20.40 temperature 30.0 270 < th dose independent rect. 12 20
967 20.40 temperature 15.0 90 > th dose independent rect. 12 23
969 20.40 temperature 10.0 270 > th dose dependent rect. 23 3
974 20.40 radiation 40.0 270 < th dose dependent rect. 3 8
986 20.41 humidity 50.0 4320 < th dose independent no NA NA
994 20.41 humidity 50.0 43200 > th dose independent rect. 23 6