Os08g0307700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0307700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.27 | 0.41 | 7.66 | -0.346 | 2.34 | -0.986 | -0.227 | -0.26 | -0.214 | 6.12 | 27.09 | 10 | -- | -- |
| 76.28 | 0.407 | 7.67 | -0.343 | 2.33 | -0.989 | -0.2 | -- | -0.223 | 6.03 | 23.45 | 9 | -- | -- |
| 76.12 | 0.406 | 7.67 | -0.338 | 2.33 | -0.991 | -- | -0.217 | -0.217 | 6.03 | 23.59 | 9 | -- | -- |
| 76.34 | 0.407 | 7.66 | -0.338 | 2.32 | -1.01 | -- | -- | -0.214 | 6 | 23.37 | 9 | -- | -- |
| 346.74 | 0.867 | 7.71 | -0.233 | -- | -0.95 | -- | -0.0375 | -0.183 | -- | 8.53 | 6 | -- | -- |
| 94.74 | 0.456 | 7.64 | -0.304 | 2.52 | -- | 0.0616 | -- | -0.201 | 7.53 | -- | -- | -- | -- |
| 94.75 | 0.456 | 7.64 | -0.302 | 2.52 | -- | -- | -- | -0.201 | 7.53 | -- | -- | -- | -- |
| 346.75 | 0.867 | 7.71 | -0.233 | -- | -0.95 | -- | -- | -0.182 | -- | 8.53 | 6 | -- | -- |
| 79.34 | 0.415 | 7.65 | -- | 2.32 | -0.991 | -- | -- | -0.176 | 6.03 | 23.26 | 9 | -- | -- |
| 435.26 | 0.975 | 7.7 | -0.265 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 97.16 | 0.461 | 7.64 | -- | 2.52 | -- | -- | -- | -0.168 | 7.54 | -- | -- | -- | -- |
| 344.74 | 0.865 | 7.7 | -- | -- | -0.973 | -- | -- | -0.15 | -- | 9.17 | 2 | -- | -- |
| 437.11 | 0.976 | 7.7 | -- | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 2 | 68.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 3 | 69.04 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 5 | 69.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 6 | 69.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 6 |
| 7 | 69.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 8 | 69.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 9 | 69.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 15 | 69.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 16 | 69.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 28 | 69.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 9 |
| 29 | 69.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 32 | 69.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 35 | 69.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 39 | 70.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 43 | 70.12 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 44 | 70.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 45 | 70.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 48 | 70.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 49 | 70.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 50 | 70.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 51 | 70.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 53 | 70.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 54 | 70.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 64 | 70.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 67 | 70.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 18 |
| 68 | 70.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 18 |
| 71 | 70.55 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 72 | 70.58 | radiation | 20.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 74 | 70.61 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 101 | 71.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 103 | 71.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 104 | 71.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 116 | 71.28 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 123 | 71.29 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 125 | 71.32 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 131 | 71.47 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 140 | 71.54 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 155 | 71.65 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 164 | 71.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 170 | 71.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 175 | 71.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 176 | 71.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 177 | 71.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 178 | 71.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 179 | 71.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 185 | 71.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 186 | 71.78 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 199 | 71.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 200 | 71.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 201 | 71.88 | radiation | 1.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 207 | 71.90 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 226 | 72.00 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 17 |
| 230 | 72.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 231 | 72.03 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 233 | 72.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 239 | 72.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 240 | 72.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 241 | 72.09 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 242 | 72.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 244 | 72.10 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 246 | 72.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 15 |
| 247 | 72.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 257 | 72.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 267 | 72.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 272 | 72.31 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 19 |
| 310 | 72.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 317 | 72.48 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 320 | 72.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 321 | 72.51 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 349 | 72.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 363 | 72.72 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 17 |
| 371 | 72.78 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 410 | 72.91 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 11 |
| 424 | 72.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 427 | 72.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 428 | 72.98 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 461 | 73.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 478 | 73.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 511 | 73.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 551 | 73.32 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 575 | 73.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 597 | 73.46 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 606 | 73.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 681 | 73.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 683 | 73.63 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 685 | 73.63 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 687 | 73.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 692 | 73.64 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 709 | 73.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 722 | 73.69 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 19 |
| 725 | 73.69 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 12 | 22 |
| 729 | 73.70 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 741 | 73.72 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 748 | 73.74 | radiation | 20.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 754 | 73.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 5 |
| 756 | 73.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 769 | 73.79 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 771 | 73.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 862 | 73.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 870 | 73.99 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 872 | 74.01 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 14 |
| 956 | 74.20 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 957 | 74.20 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 7 |
| 959 | 74.20 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 7 |
| 961 | 74.21 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 964 | 74.22 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 966 | 74.22 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 7 |
| 968 | 74.22 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 7 |
| 971 | 74.22 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 988 | 74.24 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |