Os08g0298800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0298800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 360.3 | 0.892 | 6.03 | -2.13 | 1.18 | -1.83 | -0.236 | 0.776 | 1.58 | 13.7 | 14.01 | 2989 | -- | -- |
| 360.84 | 0.885 | 6.06 | -2.31 | 1.2 | -1.87 | -0.242 | -- | 1.53 | 13.8 | 11.18 | 3090 | -- | -- |
| 360.51 | 0.884 | 6.03 | -2.13 | 1.19 | -1.84 | -- | 0.786 | 1.58 | 13.7 | 13.77 | 3012 | -- | -- |
| 361.07 | 0.885 | 6.06 | -2.32 | 1.2 | -1.87 | -- | -- | 1.53 | 13.8 | 11.02 | 3091 | -- | -- |
| 428.92 | 0.965 | 6.02 | -2 | -- | -2.18 | -- | 1.16 | 1.65 | -- | 12.53 | 2501 | -- | -- |
| 427.23 | 0.969 | 6.14 | -3.08 | 1.28 | -- | -0.219 | -- | 1.15 | 13.8 | -- | -- | -- | -- |
| 427.42 | 0.968 | 6.14 | -3.09 | 1.28 | -- | -- | -- | 1.15 | 13.8 | -- | -- | -- | -- |
| 430.05 | 0.966 | 6.05 | -2.29 | -- | -2.18 | -- | -- | 1.57 | -- | 11.9 | 2506 | -- | -- |
| 395.3 | 0.926 | 5.88 | -- | 1.21 | -2.73 | -- | -- | 2.31 | 13.8 | 8.824 | 47239 | -- | -- |
| 527.09 | 1.07 | 6.16 | -3.14 | -- | -- | -- | -- | 1.12 | -- | -- | -- | -- | -- |
| 679.37 | 1.22 | 6.06 | -- | 1.34 | -- | -- | -- | 1.5 | 13.9 | -- | -- | -- | -- |
| 484.67 | 1.03 | 5.9 | -- | -- | -2.77 | -- | -- | 2.29 | -- | 8.098 | 47154 | -- | -- |
| 787.89 | 1.31 | 6.08 | -- | -- | -- | -- | -- | 1.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 347.55 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 2 | 348.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 16 | 351.71 | temperature | 30.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 19 | 351.78 | temperature | 15.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 24 | 352.39 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 34 | 353.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 40 | 353.46 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 9 |
| 71 | 355.39 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 83 | 355.88 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 89 | 356.37 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 99 | 356.90 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 106 | 357.06 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 122 | 357.41 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 169 | 358.33 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 218 | 359.11 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 22 | 11 |
| 232 | 359.28 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 11 |
| 277 | 359.74 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 307 | 359.99 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 355 | 360.33 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 414 | 360.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 415 | 360.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 444 | 360.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 446 | 360.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 509 | 361.09 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 566 | 361.33 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 586 | 361.44 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 607 | 361.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 700 | 361.87 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 747 | 361.99 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 756 | 362.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 761 | 362.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 763 | 362.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 778 | 362.07 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 796 | 362.13 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 826 | 362.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 840 | 362.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 850 | 362.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 953 | 362.57 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 985 | 362.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 7 |