Os08g0297800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sulfotransferase family protein.
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Os08g0297800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sulfotransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 454.88 | 1 | 4.01 | -4.94 | 1.64 | -1.46 | -2.57 | 14.7 | -0.359 | 17.7 | 25.8 | 3644 | -- | -- |
| 511.24 | 1.05 | 3.6 | -3.5 | 1.85 | -3.18 | -3.58 | -- | 0.132 | 18.1 | 14.8 | 47520 | -- | -- |
| 470.27 | 1.01 | 4.02 | -4.99 | 1.62 | -1.54 | -- | 15 | -0.356 | 17.6 | 26 | 3617 | -- | -- |
| 529.2 | 1.07 | 3.63 | -3.06 | 1.69 | -2.7 | -- | -- | 0.199 | 17.9 | 14.68 | 47520 | -- | -- |
| 604.2 | 1.14 | 4.02 | -4.98 | -- | -1.61 | -- | 15.2 | -0.404 | -- | 26.4 | 3592 | -- | -- |
| 600.37 | 1.15 | 3.47 | -0.72 | 1.7 | -- | -3.17 | -- | 0.886 | 18.2 | -- | -- | -- | -- |
| 623.97 | 1.17 | 3.47 | -0.681 | 1.69 | -- | -- | -- | 0.877 | 17.9 | -- | -- | -- | -- |
| 672.18 | 1.21 | 3.6 | -3.16 | -- | -3.29 | -- | -- | 0.14 | -- | 14.9 | 33598 | -- | -- |
| 620.28 | 1.16 | 3.48 | -- | 1.7 | -0.711 | -- | -- | 0.872 | 17.9 | 8.925 | 47520 | -- | -- |
| 771.55 | 1.3 | 3.45 | -0.732 | -- | -- | -- | -- | 0.838 | -- | -- | -- | -- | -- |
| 636.2 | 1.18 | 3.46 | -- | 1.7 | -- | -- | -- | 0.953 | 17.9 | -- | -- | -- | -- |
| 770.84 | 1.29 | 3.45 | -- | -- | -0.687 | -- | -- | 0.839 | -- | 9.1 | 47520 | -- | -- |
| 785.68 | 1.31 | 3.43 | -- | -- | -- | -- | -- | 0.919 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 431.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 2 | 433.01 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 4 | 433.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 12 | 433.42 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 13 | 433.63 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 14 | 433.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 24 | 434.14 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 77 | 437.05 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 15 |
| 90 | 437.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 92 | 437.98 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 164 | 440.03 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 165 | 440.03 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 178 | 440.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 17 |
| 192 | 440.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 7 |
| 195 | 440.61 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 11 |
| 207 | 440.71 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 209 | 440.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 210 | 440.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 214 | 440.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 219 | 440.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 224 | 440.80 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 275 | 440.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 286 | 440.95 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 289 | 440.95 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 321 | 441.12 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 9 |
| 323 | 441.13 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 12 |
| 428 | 442.79 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 438 | 443.19 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 441 | 443.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 448 | 443.25 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 449 | 443.25 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 17 |
| 505 | 444.10 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 534 | 444.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 565 | 444.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 571 | 445.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 577 | 445.20 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 584 | 445.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 16 |
| 596 | 445.49 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 616 | 445.61 | temperature | 20.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 626 | 445.68 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 628 | 445.70 | radiation | 1.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 640 | 445.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 6 |
| 651 | 445.97 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 689 | 446.46 | temperature | 20.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 718 | 446.67 | radiation | 1.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 765 | 447.19 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 768 | 447.23 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 788 | 447.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 790 | 447.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 795 | 447.72 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 811 | 447.80 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 812 | 447.80 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 827 | 447.80 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 837 | 447.81 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 22 | 21 |
| 848 | 447.82 | radiation | 1.0 | 43200 | < th | dose independent | no | NA | NA |
| 893 | 448.11 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 936 | 448.27 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 954 | 448.48 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 961 | 448.55 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 962 | 448.59 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 964 | 448.59 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 976 | 448.73 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 990 | 448.87 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 10 |