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Os08g0296700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.32 (0.0173) R2 : 0.611
β1 : 1.59 (0.0634) R2dD : 0.554 R2D : 0.385
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.52 (0.037) R2dN8 : 0.226 R2N8 : 0.0563
σ : 0.325
deviance : 48.41
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.91 0.297 6.31 1.6 0.0876 0.33 0.568 0.614 0.525 0.153 0.2501 44 -- --
40.25 0.295 6.31 1.59 0.0865 0.33 -0.0821 -- 0.526 0.157 0.259 43 -- --
40.68 0.297 6.31 1.62 0.0895 0.352 -- 0.352 0.573 23.5 0.2823 44 -- --
40.29 0.296 6.31 1.58 0.0855 0.332 -- -- 0.528 0.694 0.258 43 -- --
40.55 0.297 6.31 1.64 -- 0.271 -- 0.142 0.569 -- 0.31 42 -- --
42.58 0.306 6.31 1.59 0.303 -- 0.127 -- 0.523 11.7 -- -- -- --
42.65 0.306 6.31 1.6 0.303 -- -- -- 0.523 11.7 -- -- -- --
40.48 0.296 6.32 1.57 -- 0.289 -- -- 0.493 -- 0.26 43 -- --
106.38 0.483 6.36 -- 0.148 0.368 -- -- 0.346 0.0727 0.258 43 -- --
48.41 0.325 6.32 1.59 -- -- -- -- 0.52 -- -- -- -- --
109.79 0.49 6.35 -- 0.285 -- -- -- 0.345 11.4 -- -- -- --
105.54 0.478 6.36 -- -- 0.355 -- -- 0.353 -- 0.05 34 -- --
114.89 0.5 6.35 -- -- -- -- -- 0.343 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.70 temperature 10.0 1440 > th dose independent rect. 19 11
4 38.70 temperature 30.0 1440 < th dose independent rect. 19 11
8 38.70 humidity 50.0 1440 > th dose independent rect. 19 11
10 38.70 atmosphere 995.0 1440 > th dose independent rect. 19 11
11 38.70 radiation 20.0 1440 < th dose independent rect. 19 11
20 38.70 temperature 10.0 1440 > th dose independent rect. 6 13
23 39.03 temperature 10.0 720 > th dose dependent rect. 5 2
24 39.04 humidity 70.0 30 > th dose independent rect. 18 11
25 39.06 wind 9.0 4320 < th dose independent rect. 6 3
27 39.11 humidity 90.0 90 > th dose dependent rect. 5 13
28 39.13 humidity 90.0 90 > th dose dependent rect. 5 5
34 39.26 atmosphere 1005.0 10 < th dose independent rect. 5 3
48 39.35 temperature 30.0 90 < th dose independent rect. 18 11
50 39.35 humidity 50.0 720 > th dose dependent rect. 19 5
52 39.38 atmosphere 1005.0 270 < th dose independent rect. 4 1
54 39.38 humidity 90.0 90 > th dose dependent rect. 5 21
56 39.46 radiation 10.0 90 < th dose dependent rect. 17 12
58 39.47 humidity 90.0 90 > th dose dependent rect. 5 16
61 39.48 radiation 1.0 30 < th dose independent rect. 18 11
62 39.48 temperature 30.0 10 < th dose independent rect. 9 20
68 39.53 temperature 30.0 90 < th dose independent rect. 8 21
75 39.55 wind 1.0 14400 < th dose dependent rect. 1 3
80 39.56 precipitation 0.1 720 < th dose independent rect. 7 22
82 39.56 precipitation 0.1 720 < th dose dependent rect. 7 22
91 39.59 humidity 90.0 90 > th dose independent rect. 5 5
95 39.59 radiation 10.0 90 < th dose dependent rect. 5 3
98 39.60 radiation 10.0 720 < th dose independent rect. 5 1
100 39.60 temperature 10.0 30 > th dose independent rect. 18 11
102 39.60 atmosphere 995.0 30 > th dose independent rect. 18 11
106 39.60 temperature 10.0 30 > th dose independent rect. 5 13
108 39.60 atmosphere 1015.0 30 < th dose independent rect. 5 13
109 39.60 precipitation 0.1 30 < th dose independent rect. 5 13
111 39.60 precipitation 0.1 30 < th dose dependent rect. 5 13
112 39.61 humidity 50.0 1440 > th dose independent rect. 6 4
114 39.62 wind 9.0 30 < th dose independent rect. 18 11
116 39.62 radiation 1.0 90 < th dose dependent rect. 9 20
121 39.63 radiation 1.0 90 < th dose dependent rect. 12 17
122 39.63 humidity 90.0 90 > th dose dependent rect. 5 18
125 39.65 precipitation 0.1 30 < th dose independent rect. 18 11
126 39.65 radiation 1.0 90 < th dose independent rect. 9 20
129 39.65 precipitation 0.1 30 < th dose dependent rect. 18 11
132 39.66 wind 5.0 30 < th dose independent rect. 18 11
134 39.66 radiation 1.0 90 < th dose independent rect. 12 17
142 39.68 humidity 90.0 720 > th dose independent rect. 20 2
148 39.69 wind 9.0 30 < th dose dependent rect. 18 11
159 39.73 wind 9.0 30 < th dose independent rect. 5 13
161 39.74 radiation 20.0 30 > th dose independent rect. 11 1
167 39.75 temperature 10.0 1440 > th dose independent rect. 6 4
170 39.75 atmosphere 995.0 1440 > th dose independent rect. 6 4
171 39.75 atmosphere 1015.0 1440 < th dose independent rect. 6 4
175 39.75 temperature 10.0 1440 > th dose independent rect. 10 20
193 39.77 atmosphere 1010.0 90 < th dose dependent rect. 5 2
208 39.79 humidity 50.0 30 > th dose independent rect. 5 13
218 39.81 humidity 50.0 30 > th dose dependent rect. 18 11
219 39.81 atmosphere 995.0 30 > th dose dependent rect. 18 11
232 39.83 precipitation 0.1 720 < th dose independent rect. 17 18
238 39.83 precipitation 0.1 720 < th dose dependent rect. 17 18
240 39.84 humidity 90.0 270 > th dose dependent rect. 5 1
245 39.85 radiation 10.0 10 > th dose dependent rect. 11 1
247 39.85 humidity 90.0 720 > th dose dependent rect. 20 3
257 39.87 temperature 30.0 10 < th dose independent rect. 11 18
269 39.90 temperature 30.0 90 < th dose dependent rect. 5 3
273 39.91 wind 1.0 14400 < th dose independent rect. 24 4
278 39.92 precipitation 0.1 720 < th dose independent rect. 17 2
281 39.92 precipitation 0.1 720 < th dose dependent rect. 17 2
285 39.92 radiation 1.0 90 < th dose dependent rect. 5 6
287 39.93 atmosphere 1005.0 30 > th dose independent rect. 18 11
288 39.93 atmosphere 995.0 30 > th dose independent rect. 5 13
297 39.94 radiation 20.0 43200 > th dose independent rect. 15 2
324 39.97 wind 7.0 720 < th dose independent rect. 17 2
328 39.97 precipitation 0.1 720 < th dose independent rect. 15 14
329 39.97 precipitation 0.1 720 < th dose independent rect. 24 19
338 39.97 precipitation 0.1 720 < th dose dependent rect. 15 14
339 39.97 precipitation 0.1 720 < th dose dependent rect. 24 19
346 39.99 radiation 1.0 90 < th dose independent rect. 5 3
362 39.99 atmosphere 1005.0 90 < th dose independent rect. 14 18
423 40.01 wind 1.0 43200 < th dose dependent rect. 22 8
447 40.05 precipitation 0.1 720 < th dose independent rect. 17 11
455 40.05 precipitation 0.1 720 < th dose dependent rect. 17 11
458 40.06 temperature 20.0 720 > th dose independent rect. 5 1
512 40.08 radiation 20.0 90 < th dose independent rect. 5 3
517 40.09 wind 1.0 14400 > th dose independent rect. 1 3
521 40.09 wind 1.0 43200 < th dose dependent rect. 12 1
527 40.09 wind 1.0 43200 < th dose dependent rect. 18 12
532 40.10 wind 9.0 4320 < th dose independent rect. 4 2
533 40.10 precipitation 0.1 720 < th dose independent rect. 23 6
534 40.10 atmosphere 1015.0 30 < th dose independent rect. 18 11
537 40.10 precipitation 0.1 720 < th dose dependent rect. 23 6
540 40.10 temperature 10.0 30 > th dose dependent rect. 5 13
548 40.11 wind 9.0 720 < th dose independent rect. 7 22
559 40.12 wind 1.0 720 > th dose independent rect. 17 2
608 40.15 radiation 1.0 30 > th dose independent rect. 12 21
633 40.17 radiation 20.0 43200 > th dose independent sin 14 NA
634 40.17 humidity 70.0 720 > th dose independent rect. 19 5
645 40.18 temperature 30.0 720 < th dose independent rect. 5 2
662 40.18 atmosphere 1005.0 270 < th dose independent rect. 22 9
683 40.18 temperature 10.0 720 > th dose independent rect. 7 22
720 40.21 wind 9.0 4320 < th dose independent rect. 23 10
775 40.23 temperature 10.0 720 > th dose independent rect. 17 2
776 40.23 atmosphere 1015.0 720 < th dose independent rect. 17 2
777 40.23 radiation 30.0 720 < th dose independent rect. 17 2
779 40.23 precipitation 0.1 720 < th dose independent rect. 5 2
785 40.23 temperature 10.0 720 > th dose independent rect. 19 22
786 40.23 wind 1.0 4320 < th dose dependent rect. 14 1
787 40.23 precipitation 0.1 720 < th dose dependent rect. 5 2
795 40.24 humidity 70.0 90 > th dose independent rect. 5 3
798 40.24 humidity 90.0 90 > th dose independent rect. 5 13
799 40.24 atmosphere 1005.0 90 < th dose independent rect. 17 15
800 40.24 humidity 50.0 720 > th dose dependent rect. 5 2
829 40.25 wind 1.0 30 > th dose independent rect. 5 13
832 40.25 radiation 20.0 43200 < th dose dependent rect. 15 1
845 40.26 humidity 90.0 10 > th dose independent rect. 6 1
851 40.26 wind 1.0 720 < th dose independent rect. 14 7
852 40.26 radiation 40.0 30 < th dose independent rect. 5 13
854 40.26 radiation 10.0 43200 > th dose dependent rect. 15 1
874 40.27 wind 1.0 43200 < th dose dependent sin 10 NA
891 40.28 radiation 1.0 720 > th dose independent rect. 17 12
903 40.28 radiation 1.0 90 < th dose dependent rect. 3 23
907 40.29 wind 1.0 43200 < th dose independent rect. 22 8
910 40.29 atmosphere 995.0 90 > th dose independent rect. 8 21
912 40.29 radiation 1.0 30 > th dose independent rect. 12 23
918 40.29 wind 1.0 720 < th dose dependent rect. 14 7
958 40.31 atmosphere 1005.0 10 < th dose independent rect. 24 9
959 40.31 wind 1.0 43200 < th dose independent rect. 22 11
960 40.31 humidity 70.0 720 > th dose independent rect. 19 13
994 40.32 radiation 20.0 30 < th dose independent rect. 5 7
995 40.32 wind 1.0 43200 < th dose independent rect. 4 13
996 40.32 wind 9.0 90 < th dose independent rect. 8 21