Os08g0293100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0293100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.9 | 0.647 | 7.09 | -1.74 | 0.863 | 2.38 | 1.7 | -1.24 | -0.79 | 18.9 | 17.19 | 325 | -- | -- |
| 190.87 | 0.643 | 7.06 | -1.54 | 0.856 | 2.45 | 1.43 | -- | -0.739 | 18.8 | 16.28 | 348 | -- | -- |
| 195.91 | 0.652 | 7.06 | -1.55 | 0.874 | 2.51 | -- | 0.0569 | -0.729 | 18.3 | 15.4 | 380 | -- | -- |
| 195.57 | 0.651 | 7.06 | -1.55 | 0.863 | 2.34 | -- | -- | -0.738 | 18.2 | 17.3 | 397 | -- | -- |
| 222.49 | 0.695 | 7.08 | -1.69 | -- | 3.04 | -- | 0.29 | -0.846 | -- | 17.3 | 385 | -- | -- |
| 266.31 | 0.765 | 6.99 | -0.974 | 1.6 | -- | 1.87 | -- | -0.349 | 18.1 | -- | -- | -- | -- |
| 274.71 | 0.776 | 6.99 | -0.991 | 1.61 | -- | -- | -- | -0.342 | 18 | -- | -- | -- | -- |
| 222.1 | 0.694 | 7.07 | -1.73 | -- | 2.97 | -- | -- | -0.862 | -- | 17.9 | 395 | -- | -- |
| 252.29 | 0.74 | 7.02 | -- | 0.997 | 1.73 | -- | -- | -0.491 | 17.4 | 20.28 | 563 | -- | -- |
| 409.22 | 0.945 | 6.96 | -1.04 | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
| 300.61 | 0.811 | 6.96 | -- | 1.63 | -- | -- | -- | -0.231 | 18 | -- | -- | -- | -- |
| 293.55 | 0.798 | 7.01 | -- | -- | 2.33 | -- | -- | -0.596 | -- | 20.1 | 403 | -- | -- |
| 437.68 | 0.976 | 6.94 | -- | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 2 | 183.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 8 | 185.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 12 | 186.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 20 | 186.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 25 | 186.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 62 | 187.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 87 | 188.07 | temperature | 20 | 1440 | > th | dose dependent | sin | 21 | NA |
| 298 | 189.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 459 | 190.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 509 | 191.11 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 629 | 191.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 637 | 191.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 708 | 192.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 761 | 192.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 767 | 192.31 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 783 | 192.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 918 | 193.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 951 | 193.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 14 |
| 982 | 193.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 22 |