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Os08g0290500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AF-10 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.83 (0.026) R2 : 0.417
β1 : 1.13 (0.0953) R2dD : 0.186 R2D : 0.0369
β2 : 0.56 (0.0645) R2dC : 0.0966 R2C : 0.0169
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.726 (0.0556) R2dN8 : 0.292 R2N8 : 0.141
σ : 0.489
deviance : 109.15
__
_____
C
peak time of C : 14.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.62 0.455 7.84 1.1 0.373 -0.626 0.712 -0.19 0.749 19.6 17.09 7 -- --
93.77 0.451 7.84 1.1 0.368 -0.617 0.617 -- 0.75 19.4 17.12 6 -- --
94.86 0.454 7.84 1.09 0.369 -0.61 -- 0.0123 0.751 19.3 17.5 6 -- --
94.67 0.453 7.84 1.1 0.374 -0.608 -- -- 0.747 19.3 16.57 5 -- --
101.71 0.47 7.83 1.09 -- -0.547 -- 0.0106 0.742 -- 17.18 6 -- --
108.94 0.489 7.84 1.12 0.56 -- 0.258 -- 0.724 15 -- -- -- --
109.15 0.489 7.83 1.13 0.56 -- -- -- 0.726 14.9 -- -- -- --
101.63 0.47 7.83 1.09 -- -0.543 -- -- 0.743 -- 16.69 5 -- --
126.09 0.523 7.86 -- 0.372 -0.659 -- -- 0.634 19.9 17.12 6 -- --
127.22 0.527 7.84 1.11 -- -- -- -- 0.711 -- -- -- -- --
142.76 0.559 7.86 -- 0.538 -- -- -- 0.6 14.9 -- -- -- --
132.83 0.537 7.86 -- -- -0.556 -- -- 0.622 -- 17.09 6 -- --
159.45 0.589 7.86 -- -- -- -- -- 0.589 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.85 temperature 10.0 30 > th dose dependent rect. 9 19
20 85.87 temperature 15.0 270 > th dose dependent rect. 9 1
21 86.00 temperature 10.0 270 > th dose dependent rect. 20 15
30 86.46 radiation 30.0 90 < th dose independent rect. 3 6
31 86.54 temperature 15.0 10 > th dose dependent rect. 9 5
45 87.02 temperature 10.0 270 > th dose dependent rect. 6 7
54 87.31 humidity 70.0 90 > th dose independent rect. 3 6
68 87.79 precipitation 0.1 10 < th dose independent rect. 3 6
69 87.79 precipitation 0.1 10 < th dose dependent rect. 3 6
71 87.81 atmosphere 995.0 10 > th dose dependent rect. 3 6
78 87.96 temperature 25.0 270 < th dose independent rect. 3 2
83 88.01 temperature 30.0 90 < th dose independent rect. 3 6
86 88.04 temperature 30.0 90 < th dose dependent rect. 3 16
87 88.05 wind 9.0 10 < th dose independent rect. 9 18
89 88.11 wind 9.0 90 < th dose independent rect. 9 18
91 88.17 temperature 25.0 270 < th dose independent rect. 2 4
94 88.18 precipitation 0.1 10 < th dose independent rect. 9 18
96 88.18 precipitation 0.1 10 < th dose dependent rect. 9 18
99 88.24 wind 1.0 270 > th dose independent rect. 1 6
118 88.53 wind 1.0 270 > th dose independent rect. 2 4
120 88.54 wind 7.0 90 < th dose independent rect. 3 6
121 88.55 wind 7.0 10 < th dose independent rect. 3 6
128 88.57 wind 7.0 270 < th dose independent rect. 6 20
140 88.65 temperature 10.0 30 > th dose independent rect. 3 6
145 88.65 atmosphere 995.0 30 > th dose independent rect. 3 6
146 88.65 atmosphere 1015.0 30 < th dose independent rect. 3 6
148 88.65 temperature 10.0 30 > th dose independent rect. 9 18
184 88.84 temperature 10.0 270 > th dose dependent rect. 18 8
186 88.87 precipitation 0.1 270 < th dose independent rect. 2 4
187 88.87 precipitation 0.1 270 < th dose dependent rect. 2 4
189 88.90 wind 9.0 270 < th dose independent rect. 5 22
195 88.98 radiation 40.0 90 < th dose dependent rect. 3 6
209 89.06 wind 7.0 270 < th dose independent rect. 7 18
228 89.17 radiation 10.0 270 < th dose dependent rect. 2 5
244 89.31 atmosphere 1010.0 270 < th dose independent rect. 2 4
249 89.33 precipitation 0.1 270 < th dose independent rect. 3 2
252 89.33 precipitation 0.1 270 < th dose dependent rect. 3 2
255 89.34 wind 7.0 270 < th dose independent rect. 2 4
258 89.35 temperature 10.0 1440 > th dose independent rect. 3 7
261 89.35 atmosphere 995.0 1440 > th dose independent rect. 3 7
262 89.35 temperature 10.0 1440 > th dose independent rect. 10 17
268 89.39 temperature 10.0 270 > th dose independent rect. 2 4
271 89.39 humidity 50.0 270 > th dose independent rect. 2 4
274 89.39 atmosphere 995.0 270 > th dose independent rect. 2 4
280 89.39 temperature 10.0 270 > th dose independent rect. 6 20
290 89.40 temperature 30.0 270 < th dose dependent rect. 3 2
293 89.41 precipitation 0.1 270 < th dose independent rect. 1 6
295 89.41 precipitation 0.1 270 < th dose dependent rect. 1 6
309 89.46 atmosphere 1015.0 1440 < th dose independent rect. 4 6
318 89.48 radiation 30.0 270 < th dose dependent rect. 1 8
325 89.52 radiation 40.0 10 < th dose dependent rect. 13 20
326 89.54 temperature 30.0 90 < th dose dependent rect. 3 18
328 89.56 wind 9.0 30 < th dose dependent rect. 3 6
350 89.59 atmosphere 995.0 270 > th dose dependent rect. 2 4
369 89.69 precipitation 0.1 270 < th dose independent rect. 6 20
371 89.69 precipitation 0.1 270 < th dose dependent rect. 6 20
379 89.73 humidity 90.0 30 < th dose independent rect. 9 5
409 89.88 wind 7.0 270 < th dose independent rect. 1 6
412 89.88 radiation 40.0 90 < th dose dependent rect. 13 20
419 89.92 temperature 10.0 270 > th dose independent rect. 1 6
422 89.92 humidity 50.0 270 > th dose independent rect. 1 6
424 89.92 atmosphere 995.0 270 > th dose independent rect. 1 6
425 89.92 atmosphere 1015.0 270 < th dose independent rect. 1 6
429 89.92 temperature 10.0 270 > th dose independent rect. 7 18
452 89.98 wind 9.0 270 < th dose independent rect. 3 2
453 89.98 temperature 10.0 270 > th dose independent rect. 3 2
456 89.98 humidity 50.0 270 > th dose independent rect. 3 2
459 89.98 atmosphere 995.0 270 > th dose independent rect. 3 2
465 89.98 radiation 30.0 10 < th dose independent rect. 12 21
466 89.98 temperature 10.0 270 > th dose independent rect. 5 22
498 90.06 wind 7.0 270 < th dose independent rect. 9 1
505 90.09 atmosphere 995.0 30 > th dose independent rect. 9 18
506 90.10 radiation 1.0 270 > th dose independent rect. 9 1
513 90.12 wind 1.0 30 > th dose independent rect. 9 18
517 90.13 atmosphere 1015.0 30 < th dose independent rect. 9 18
525 90.18 temperature 30.0 270 < th dose dependent rect. 2 4
526 90.19 temperature 30.0 90 < th dose dependent rect. 3 6
528 90.20 wind 7.0 270 < th dose independent rect. 6 8
529 90.21 temperature 15.0 270 > th dose independent rect. 9 1
537 90.24 temperature 30.0 10 < th dose dependent rect. 4 14
542 90.26 temperature 15.0 10 > th dose dependent rect. 22 16
561 90.36 radiation 40.0 90 < th dose dependent rect. 15 18
578 90.41 temperature 15.0 10 > th dose independent rect. 14 19
610 90.50 radiation 10.0 10 > th dose independent rect. 9 6
613 90.50 radiation 10.0 270 < th dose dependent rect. 2 12
634 90.56 radiation 30.0 90 < th dose independent rect. 13 20
650 90.62 temperature 20.0 270 > th dose independent rect. 7 18
652 90.63 humidity 50.0 270 > th dose independent rect. 9 1
656 90.64 precipitation 0.1 270 < th dose independent rect. 9 1
657 90.64 precipitation 0.1 270 < th dose dependent rect. 9 1
659 90.65 humidity 50.0 90 > th dose dependent rect. 3 6
662 90.66 wind 9.0 10 < th dose independent rect. 9 5
665 90.66 wind 9.0 90 < th dose dependent rect. 9 18
670 90.68 temperature 10.0 10 > th dose independent rect. 9 5
672 90.68 atmosphere 995.0 10 > th dose independent rect. 9 5
673 90.68 atmosphere 1015.0 10 < th dose independent rect. 9 5
674 90.68 precipitation 0.1 10 < th dose independent rect. 9 5
677 90.68 precipitation 0.1 10 < th dose dependent rect. 9 5
706 90.74 temperature 10.0 1440 > th dose independent rect. 10 5
709 90.74 temperature 10.0 1440 > th dose independent rect. 15 19
714 90.75 atmosphere 995.0 270 > th dose independent rect. 9 1
715 90.75 atmosphere 1015.0 270 < th dose independent rect. 9 1
717 90.75 temperature 10.0 270 > th dose independent rect. 10 23
751 90.84 temperature 15.0 270 > th dose independent rect. 6 8
752 90.84 radiation 40.0 270 < th dose independent rect. 13 17
772 90.89 wind 1.0 30 > th dose independent rect. 9 5
773 90.89 humidity 50.0 270 > th dose independent rect. 6 8
799 90.96 precipitation 0.1 270 < th dose independent rect. 6 8
801 90.96 precipitation 0.1 10 < th dose independent rect. 14 19
802 90.96 precipitation 0.1 270 < th dose dependent rect. 6 8
803 90.96 precipitation 0.1 10 < th dose dependent rect. 14 19
812 91.00 atmosphere 995.0 10 > th dose independent rect. 15 18
859 91.09 temperature 10.0 30 > th dose dependent rect. 4 5
864 91.11 wind 1.0 270 > th dose independent rect. 9 1
866 91.12 wind 9.0 30 < th dose independent rect. 14 19
876 91.15 precipitation 0.1 270 < th dose independent rect. 14 16
881 91.15 precipitation 0.1 270 < th dose dependent rect. 14 16
884 91.17 atmosphere 995.0 270 > th dose independent rect. 6 8
885 91.17 atmosphere 1015.0 270 < th dose independent rect. 6 8
886 91.17 temperature 10.0 270 > th dose independent rect. 14 16
895 91.19 wind 9.0 270 < th dose dependent rect. 7 6
911 91.24 humidity 50.0 30 > th dose independent rect. 9 5
919 91.26 wind 9.0 270 < th dose dependent rect. 9 1
939 91.32 radiation 10.0 270 < th dose dependent rect. 2 15
942 91.32 wind 9.0 270 < th dose dependent rect. 7 18
957 91.37 wind 9.0 270 < th dose dependent rect. 6 20
970 91.41 humidity 50.0 30 > th dose independent rect. 9 18
985 91.43 temperature 20.0 10 > th dose dependent rect. 20 19
989 91.45 radiation 1.0 270 < th dose independent rect. 2 10
994 91.46 humidity 50.0 270 > th dose dependent rect. 3 2