Os08g0288000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0288000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.37 | 0.34 | 8.82 | -0.987 | 1.32 | 0.246 | 0.184 | 3.11 | 0.162 | 4.26 | 32.36 | 1115 | -- | -- |
| 52.65 | 0.338 | 8.87 | -1.46 | 1.33 | 0.605 | 0.204 | -- | 0.157 | 4.27 | 32.75 | 1095 | -- | -- |
| 52.46 | 0.337 | 8.82 | -0.982 | 1.32 | 0.243 | -- | 3.16 | 0.161 | 4.26 | 32.31 | 1109 | -- | -- |
| 52.75 | 0.338 | 8.87 | -1.45 | 1.32 | 0.601 | -- | -- | 0.158 | 4.26 | 32.79 | 1095 | -- | -- |
| 144.47 | 0.56 | 8.8 | -0.84 | -- | 0.318 | -- | 4 | 0.218 | -- | 32.05 | 1154 | -- | -- |
| 69.6 | 0.391 | 8.89 | -1.31 | 1.38 | -- | 0.34 | -- | 0.0589 | 4.08 | -- | -- | -- | -- |
| 69.92 | 0.392 | 8.89 | -1.32 | 1.39 | -- | -- | -- | 0.057 | 4.08 | -- | -- | -- | -- |
| 145.65 | 0.562 | 8.87 | -1.44 | -- | 0.755 | -- | -- | 0.22 | -- | 32.09 | 1165 | -- | -- |
| 106.63 | 0.481 | 8.84 | -- | 1.31 | 0.445 | -- | -- | 0.278 | 4.2 | 33.85 | 1074 | -- | -- |
| 174.39 | 0.617 | 8.9 | -1.26 | -- | -- | -- | -- | 0.0939 | -- | -- | -- | -- | -- |
| 115.66 | 0.503 | 8.86 | -- | 1.36 | -- | -- | -- | 0.204 | 4.09 | -- | -- | -- | -- |
| 198.76 | 0.657 | 8.84 | -- | -- | 0.609 | -- | -- | 0.345 | -- | 33.5 | 1093 | -- | -- |
| 216.34 | 0.687 | 8.87 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 2 | 52.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 3 | 53.14 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 4 | 53.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 5 | 53.30 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 6 | 53.30 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 8 | 53.40 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 9 | 53.40 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 10 | 53.40 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 12 | 53.40 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 13 | 53.40 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 18 | 53.40 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 19 | 53.40 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 20 | 53.40 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 25 | 53.44 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 26 | 53.54 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 28 | 53.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 29 | 53.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 30 | 53.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 31 | 53.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 32 | 54.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 33 | 54.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 34 | 54.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 39 | 54.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 40 | 54.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 44 | 54.73 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 46 | 54.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 47 | 54.85 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 48 | 54.85 | wind | 7.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 49 | 54.87 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 51 | 54.88 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 53 | 54.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 54 | 54.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 70 | 54.94 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 73 | 54.96 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 77 | 54.99 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 85 | 55.04 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 115 | 55.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 116 | 55.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 117 | 55.11 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 146 | 55.30 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 191 | 55.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 205 | 55.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 208 | 55.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 219 | 55.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 220 | 55.62 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 238 | 55.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 275 | 55.78 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 308 | 55.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 309 | 55.80 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |
| 503 | 55.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 515 | 56.04 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 543 | 56.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 546 | 56.11 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 547 | 56.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 555 | 56.17 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 591 | 56.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 599 | 56.31 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 607 | 56.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 610 | 56.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 611 | 56.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 613 | 56.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 614 | 56.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 617 | 56.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 618 | 56.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 619 | 56.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 623 | 56.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 625 | 56.33 | humidity | 80.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 626 | 56.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 635 | 56.36 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 653 | 56.38 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 663 | 56.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 665 | 56.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 668 | 56.42 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 670 | 56.42 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 673 | 56.43 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 698 | 56.47 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 704 | 56.48 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 705 | 56.49 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 725 | 56.52 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 735 | 56.53 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 740 | 56.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 14 |
| 743 | 56.55 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 752 | 56.56 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 753 | 56.56 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 17 |
| 755 | 56.56 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 757 | 56.57 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 7 |
| 764 | 56.57 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 822 | 56.65 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 827 | 56.66 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 831 | 56.67 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 833 | 56.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 834 | 56.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 837 | 56.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 866 | 56.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 870 | 56.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 880 | 56.75 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 898 | 56.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 916 | 56.81 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 919 | 56.82 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 920 | 56.82 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 921 | 56.82 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 922 | 56.82 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 926 | 56.82 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 931 | 56.82 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 933 | 56.82 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 937 | 56.82 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 944 | 56.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 990 | 56.88 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 7 |