Os08g0285500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0285500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.75 | 0.42 | 7.07 | -4.57 | 1.31 | -54.5 | 0.206 | -115 | 0.198 | 16.5 | 14.97 | 6094 | -- | -- |
| 95.91 | 0.46 | 8.92 | -0.184 | 1.35 | -0.201 | -0.193 | -- | 0.292 | 16.4 | 14.97 | 6094 | -- | -- |
| 79.86 | 0.416 | 7.07 | -4.57 | 1.32 | -54.4 | -- | -115 | 0.199 | 16.4 | 14.96 | 6093 | -- | -- |
| 93.23 | 0.45 | 8.93 | -0.306 | 1.34 | -0.359 | -- | -- | 0.272 | 16.3 | 17.5 | 14843 | -- | -- |
| 172.51 | 0.612 | 7.06 | -4.62 | -- | -54.5 | -- | -116 | 0.167 | -- | 15 | 6100 | -- | -- |
| 95.99 | 0.459 | 8.92 | -0.176 | 1.35 | -- | -0.212 | -- | 0.295 | 16.3 | -- | -- | -- | -- |
| 96.11 | 0.459 | 8.92 | -0.178 | 1.35 | -- | -- | -- | 0.293 | 16.4 | -- | -- | -- | -- |
| 190.9 | 0.644 | 8.92 | -0.496 | -- | -0.454 | -- | -- | 0.207 | -- | 17.7 | 14848 | -- | -- |
| 93.98 | 0.454 | 8.91 | -- | 1.37 | 0.601 | -- | -- | 0.329 | 16.3 | 17.6 | 15491 | -- | -- |
| 194.64 | 0.652 | 8.91 | -0.231 | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
| 96.94 | 0.461 | 8.91 | -- | 1.36 | -- | -- | -- | 0.313 | 16.4 | -- | -- | -- | -- |
| 188.3 | 0.641 | 8.92 | -- | -- | -0.375 | -- | -- | 0.212 | -- | 21.01 | 3266 | -- | -- |
| 196.05 | 0.654 | 8.9 | -- | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.46 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 8 | 78.58 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 10 | 78.75 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 15 | 79.14 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 26 | 79.87 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 44 | 80.82 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 47 | 81.07 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 54 | 81.11 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 57 | 81.16 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 75 | 81.64 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 22 | 12 |
| 76 | 81.65 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 85 | 81.68 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 22 | 9 |
| 122 | 81.75 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 148 | 81.83 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 161 | 81.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 179 | 81.95 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 243 | 82.01 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 246 | 82.02 | temperature | 15.0 | 4320 | < th | dose dependent | no | NA | NA |
| 247 | 82.02 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 22 |
| 268 | 82.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 286 | 82.10 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 293 | 82.15 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 300 | 82.19 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 332 | 82.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 363 | 82.38 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 380 | 82.41 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 403 | 82.50 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 404 | 82.50 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 411 | 82.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 417 | 82.57 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 422 | 82.59 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 441 | 82.64 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 469 | 82.76 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 487 | 82.81 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 517 | 82.88 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 571 | 83.08 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 589 | 83.12 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 10 | 7 |
| 595 | 83.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 8 |
| 597 | 83.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 15 |
| 616 | 83.20 | temperature | 15.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 617 | 83.20 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 619 | 83.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 630 | 83.22 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 644 | 83.26 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 22 |
| 646 | 83.27 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 654 | 83.28 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 10 |
| 659 | 83.28 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 661 | 83.28 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 666 | 83.29 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 668 | 83.30 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 674 | 83.31 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 707 | 83.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 756 | 83.47 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 871 | 83.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 886 | 83.67 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 13 |
| 898 | 83.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 899 | 83.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 900 | 83.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 902 | 83.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 913 | 83.71 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 22 |
| 928 | 83.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 936 | 83.74 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 10 |
| 940 | 83.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 962 | 83.77 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 965 | 83.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |