Os08g0278100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0278100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.78 | 0.318 | 6.4 | 0.383 | 1.26 | -0.662 | -1.27 | 1.59 | 0.143 | 21.5 | 25.5 | 659 | -- | -- |
| 49.11 | 0.326 | 6.43 | -0.0364 | 1.24 | -0.579 | -0.873 | -- | 0.0305 | 21.6 | 25.6 | 670 | -- | -- |
| 50.73 | 0.332 | 6.38 | 0.492 | 1.24 | -0.771 | -- | 1.71 | 0.149 | 21.8 | 26.3 | 864 | -- | -- |
| 51.24 | 0.333 | 6.44 | 0.000391 | 1.24 | -0.584 | -- | -- | 0.011 | 21.4 | 25.29 | 636 | -- | -- |
| 109.73 | 0.491 | 6.43 | 0.0176 | -- | -0.263 | -- | 0.548 | -0.0954 | -- | 26.3 | 864 | -- | -- |
| 59.8 | 0.363 | 6.48 | -0.21 | 0.945 | -- | -0.906 | -- | -0.212 | 21.9 | -- | -- | -- | -- |
| 62.95 | 0.372 | 6.48 | -0.174 | 0.951 | -- | -- | -- | -0.209 | 21.8 | -- | -- | -- | -- |
| 95.32 | 0.457 | 6.41 | 0.0562 | -- | -0.547 | -- | -- | -0.00896 | -- | 23.09 | 1594 | -- | -- |
| 51.24 | 0.333 | 6.44 | -- | 1.24 | -0.589 | -- | -- | 0.0126 | 21.4 | 25.21 | 636 | -- | -- |
| 117.06 | 0.506 | 6.46 | -0.164 | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
| 63.75 | 0.374 | 6.48 | -- | 0.951 | -- | -- | -- | -0.19 | 21.8 | -- | -- | -- | -- |
| 90.81 | 0.445 | 6.41 | -- | -- | -0.632 | -- | -- | -0.0285 | -- | 22.3 | 1613 | -- | -- |
| 117.77 | 0.507 | 6.45 | -- | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.38 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 16 |
| 4 | 41.60 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 14 |
| 9 | 42.01 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 12 | 42.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 13 | 42.10 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 48 | 42.53 | temperature | 25 | 720 | > th | dose independent | sin | 18 | NA |
| 63 | 42.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 94 | 43.01 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 114 | 43.14 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 117 | 43.17 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 11 |
| 177 | 43.61 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 21 |
| 181 | 43.65 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 8 |
| 516 | 45.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 788 | 46.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 807 | 46.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 893 | 46.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 895 | 46.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 897 | 46.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 908 | 46.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 16 |
| 922 | 46.36 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 959 | 46.43 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 963 | 46.45 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 23 |
| 964 | 46.45 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 987 | 46.49 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 23 |