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Os08g0276400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.17 (0.0285) R2 : 0.543
β1 : 1.48 (0.104) R2dD : 0.208 R2D : 0.165
β2 : 1.33 (0.0738) R2dC : 0.328 R2C : 0.326
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.325 (0.0608) R2dN8 : 0.0384 R2N8 : 0.00167
σ : 0.536
deviance : 130.89
__
_____
C
peak time of C : 7.08
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
117.84 0.51 6.18 1.18 1.33 -1.46 0.931 2.4 0.412 7.36 50 1090 -- --
119.65 0.509 6.15 1.3 1.34 -0.869 1.05 -- 0.402 7.34 51 981 -- --
120.17 0.511 6.18 1.2 1.34 -1.49 -- 2.64 0.411 7.35 50.37 1090 -- --
121.95 0.514 6.15 1.36 1.34 -0.631 -- -- 0.412 7.33 53.03 1069 -- --
214.57 0.682 6.21 1.23 -- -1.4 -- 2.63 0.428 -- 50.68 1193 -- --
128.56 0.532 6.17 1.46 1.33 -- 0.941 -- 0.328 7.1 -- -- -- --
130.89 0.536 6.17 1.48 1.33 -- -- -- 0.325 7.08 -- -- -- --
215.05 0.683 6.17 1.42 -- -0.489 -- -- 0.483 -- 64 1349 -- --
170.33 0.608 6.15 -- 1.39 -0.712 -- -- 0.384 7.2 55.95 1059 -- --
224.23 0.7 6.2 1.5 -- -- -- -- 0.349 -- -- -- -- --
188.37 0.642 6.2 -- 1.35 -- -- -- 0.161 7.01 -- -- -- --
265.86 0.759 6.19 -- -- -0.711 -- -- 0.367 -- 60 1381 -- --
283.78 0.786 6.23 -- -- -- -- -- 0.183 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.92 wind 1.0 43200 < th dose independent rect. 3 1
2 113.93 radiation 10.0 43200 < th dose independent rect. 18 13
4 114.12 radiation 10.0 43200 < th dose independent rect. 4 3
6 114.12 radiation 10.0 43200 < th dose independent rect. 21 10
15 114.34 radiation 1.0 43200 > th dose dependent rect. 18 12
16 114.62 radiation 10.0 43200 < th dose independent rect. 17 1
17 114.74 wind 1.0 90 < th dose independent rect. 23 3
18 114.78 radiation 10.0 43200 < th dose independent rect. 17 6
29 114.87 radiation 1.0 43200 > th dose dependent rect. 4 2
39 114.89 wind 1.0 90 < th dose dependent rect. 23 3
40 115.02 radiation 1.0 14400 > th dose independent rect. 9 1
41 115.15 radiation 1.0 14400 < th dose independent rect. 9 1
43 115.35 wind 1.0 43200 < th dose dependent rect. 4 1
44 115.36 radiation 10.0 43200 < th dose dependent rect. 18 12
46 115.41 wind 1.0 43200 > th dose independent rect. 3 1
47 115.47 radiation 30.0 43200 < th dose dependent rect. 18 12
51 115.62 precipitation 0.1 14400 < th dose independent rect. 4 7
52 115.62 precipitation 0.1 14400 < th dose dependent rect. 4 7
54 115.74 temperature 15.0 14400 > th dose independent rect. 9 1
55 115.75 precipitation 0.1 14400 > th dose independent rect. 4 7
57 115.86 precipitation 0.1 14400 > th dose dependent rect. 4 7
62 116.12 wind 9.0 43200 > th dose independent rect. 11 5
63 116.13 wind 9.0 43200 > th dose independent rect. 14 2
65 116.19 radiation 10.0 43200 < th dose dependent rect. 4 2
66 116.19 wind 9.0 43200 > th dose dependent rect. 11 4
68 116.21 temperature 15.0 14400 < th dose independent rect. 9 1
74 116.23 radiation 10.0 43200 < th dose dependent rect. 21 9
85 116.30 wind 9.0 43200 > th dose dependent rect. 14 2
86 116.31 radiation 40.0 43200 < th dose dependent rect. 4 2
106 116.40 wind 1.0 43200 < th dose dependent rect. 18 12
107 116.41 radiation 1.0 43200 > th dose independent rect. 4 1
111 116.41 wind 9.0 43200 < th dose independent rect. 11 5
195 116.61 wind 9.0 43200 < th dose independent rect. 14 2
212 116.68 radiation 20.0 43200 > th dose dependent rect. 16 15
222 116.75 wind 9.0 43200 > th dose independent rect. 11 1
225 116.76 humidity 70.0 720 > th dose independent rect. 17 9
230 116.79 temperature 25.0 14400 < th dose independent rect. 2 1
240 116.83 wind 1.0 90 < th dose independent rect. 17 9
253 116.89 precipitation 0.1 43200 < th dose independent rect. 9 1
255 116.89 radiation 10.0 43200 > th dose dependent rect. 17 1
256 116.89 precipitation 0.1 43200 < th dose dependent rect. 9 1
286 116.94 temperature 25.0 14400 > th dose independent rect. 23 7
290 116.95 radiation 30.0 4320 > th dose independent rect. 16 16
295 116.96 temperature 25.0 14400 < th dose independent rect. 24 5
314 117.01 radiation 30.0 4320 > th dose independent rect. 7 1
315 117.01 radiation 30.0 14400 > th dose independent rect. 16 1
347 117.02 precipitation 0.1 43200 > th dose independent rect. 9 1
349 117.02 precipitation 0.1 43200 > th dose dependent rect. 9 1
374 117.07 temperature 25.0 14400 > th dose independent rect. 4 2
375 117.07 temperature 25.0 14400 > th dose independent rect. 2 4
380 117.08 temperature 25.0 14400 > th dose independent rect. 24 1
382 117.08 humidity 70.0 720 < th dose independent rect. 17 3
396 117.08 wind 1.0 43200 < th dose dependent rect. 20 10
405 117.12 humidity 90.0 43200 < th dose independent rect. 2 1
407 117.13 precipitation 0.1 14400 < th dose independent rect. 6 1
409 117.13 precipitation 0.1 14400 < th dose dependent rect. 6 1
411 117.14 temperature 25.0 10 < th dose independent rect. 8 20
412 117.14 temperature 25.0 10 < th dose independent rect. 6 22
414 117.15 wind 1.0 270 < th dose independent rect. 23 1
426 117.16 wind 1.0 43200 < th dose dependent rect. 22 8
427 117.17 temperature 25.0 14400 < th dose independent rect. 4 2
433 117.18 humidity 90.0 43200 > th dose independent rect. 2 1
434 117.18 humidity 90.0 43200 > th dose independent rect. 2 3
435 117.18 radiation 1.0 43200 < th dose independent rect. 8 6
436 117.18 radiation 40.0 43200 < th dose independent rect. 15 18
437 117.18 temperature 25.0 14400 < th dose dependent rect. 11 1
443 117.21 radiation 1.0 43200 > th dose independent rect. 8 6
445 117.21 radiation 1.0 43200 < th dose dependent rect. 8 6
465 117.29 radiation 1.0 43200 < th dose independent rect. 9 4
468 117.30 precipitation 0.1 14400 > th dose independent rect. 6 1
469 117.30 radiation 1.0 43200 > th dose independent rect. 9 4
470 117.30 precipitation 0.1 14400 > th dose dependent rect. 6 1
471 117.30 radiation 1.0 43200 < th dose dependent rect. 9 4
493 117.38 temperature 25.0 14400 > th dose independent rect. 11 1
497 117.39 radiation 30.0 4320 > th dose dependent rect. 7 1
526 117.44 radiation 30.0 4320 < th dose independent rect. 24 8
527 117.44 temperature 25.0 14400 > th dose dependent rect. 24 1
538 117.48 radiation 30.0 43200 < th dose independent rect. 5 3
542 117.48 temperature 25.0 14400 > th dose dependent rect. 5 1
546 117.49 radiation 30.0 4320 < th dose independent rect. 2 6
553 117.50 temperature 15.0 14400 > th dose independent rect. 5 7
554 117.50 radiation 30.0 43200 < th dose independent rect. 19 13
561 117.52 radiation 30.0 43200 < th dose independent rect. 1 7
563 117.52 radiation 30.0 43200 < th dose independent rect. 21 11
579 117.54 temperature 25.0 1440 > th dose dependent rect. 21 1
593 117.57 wind 9.0 14400 < th dose independent rect. 4 8
595 117.57 temperature 20.0 14400 < th dose dependent rect. 21 2
614 117.60 radiation 30.0 4320 < th dose independent rect. 17 15
648 117.62 wind 1.0 90 < th dose dependent rect. 17 10
678 117.64 temperature 25.0 14400 < th dose independent rect. 11 1
679 117.64 temperature 30.0 1440 < th dose independent rect. 12 1
683 117.64 radiation 30.0 4320 < th dose independent rect. 20 12
688 117.65 humidity 90.0 14400 > th dose independent rect. 21 4
698 117.68 temperature 25.0 14400 > th dose dependent rect. 2 1
710 117.71 temperature 30.0 1440 > th dose independent rect. 12 1
711 117.71 temperature 25.0 14400 > th dose dependent rect. 24 3
718 117.73 temperature 25.0 14400 > th dose dependent rect. 24 6
720 117.74 radiation 30.0 4320 < th dose independent rect. 6 2
769 117.81 temperature 20.0 14400 > th dose independent rect. 11 9
779 117.83 radiation 30.0 43200 > th dose dependent rect. 15 17
782 117.84 temperature 20.0 14400 < th dose independent rect. 11 9
786 117.84 temperature 20.0 14400 < th dose dependent rect. 10 13
793 117.85 temperature 25.0 14400 > th dose dependent rect. 2 4
809 117.88 temperature 20.0 14400 < th dose independent rect. 7 15
831 117.92 temperature 20.0 14400 > th dose independent rect. 7 14
832 117.92 wind 1.0 270 < th dose dependent rect. 23 1
837 117.92 wind 5.0 14400 > th dose dependent rect. 2 10
844 117.94 temperature 15.0 14400 < th dose independent rect. 4 8
850 117.95 temperature 20.0 14400 < th dose independent rect. 9 12
854 117.96 humidity 50.0 1440 > th dose independent rect. 13 4
872 117.99 temperature 30.0 1440 > th dose independent rect. 11 3
873 117.99 temperature 30.0 1440 < th dose independent rect. 11 3
886 118.01 humidity 70.0 720 < th dose dependent rect. 18 2
899 118.02 temperature 20.0 14400 > th dose independent rect. 9 12
915 118.05 humidity 70.0 720 < th dose independent sin 12 NA
920 118.06 humidity 90.0 14400 > th dose independent rect. 22 1
936 118.08 humidity 50.0 1440 < th dose dependent rect. 16 1
950 118.10 wind 9.0 14400 > th dose independent rect. 4 8
955 118.11 temperature 20.0 14400 < th dose independent rect. 18 1
956 118.11 humidity 50.0 1440 < th dose independent rect. 16 1
965 118.12 wind 9.0 43200 < th dose independent rect. 11 11
967 118.12 wind 1.0 90 < th dose independent rect. 10 16
988 118.14 wind 9.0 14400 < th dose independent rect. 1 11
994 118.15 temperature 20.0 14400 < th dose independent rect. 7 1
995 118.15 humidity 90.0 4320 > th dose independent rect. 6 1
996 118.15 wind 7.0 4320 < th dose independent rect. 17 2
998 118.15 radiation 1.0 1440 < th dose independent rect. 11 2