Os08g0270500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0270500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.47 | 0.496 | 7.01 | -1.82 | 0.289 | -0.671 | -1.2 | -1.6 | -0.0167 | 2.95 | 22.5 | 2145 | -- | -- |
| 117.3 | 0.504 | 7.07 | -2.36 | 0.252 | -0.641 | -0.869 | -- | -0.172 | 2.3 | 23.1 | 2085 | -- | -- |
| 115.73 | 0.501 | 7.01 | -1.76 | 0.326 | -0.659 | -- | -1.58 | 0.00561 | 4 | 22.5 | 2061 | -- | -- |
| 120.42 | 0.511 | 7.07 | -2.37 | 0.305 | -0.662 | -- | -- | -0.185 | 4.39 | 23.2 | 2085 | -- | -- |
| 120.89 | 0.512 | 7.01 | -1.82 | -- | -0.68 | -- | -1.52 | -0.00716 | -- | 22.4 | 2189 | -- | -- |
| 134.65 | 0.544 | 7.01 | -2.12 | 0.326 | -- | -1.16 | -- | 0.0881 | 2.99 | -- | -- | -- | -- |
| 138.96 | 0.552 | 7.01 | -2.09 | 0.331 | -- | -- | -- | 0.0944 | 3.61 | -- | -- | -- | -- |
| 124.42 | 0.52 | 7.07 | -2.4 | -- | -0.785 | -- | -- | -0.157 | -- | 24.14 | 2790 | -- | -- |
| 250.25 | 0.737 | 6.97 | -- | 0.326 | -0.259 | -- | -- | 0.249 | 3.79 | 22.31 | 409 | -- | -- |
| 145.07 | 0.563 | 7.01 | -2.08 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 254.13 | 0.746 | 6.96 | -- | 0.29 | -- | -- | -- | 0.327 | 3.66 | -- | -- | -- | -- |
| 255.88 | 0.745 | 6.97 | -- | -- | -0.23 | -- | -- | 0.262 | -- | 22.48 | 568 | -- | -- |
| 258.81 | 0.751 | 6.96 | -- | -- | -- | -- | -- | 0.334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.97 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 2 | 110.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 4 | 110.33 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 6 | 110.38 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 8 | 110.40 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 11 | 110.43 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 21 | 110.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 35 | 110.89 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 48 | 111.09 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 83 | 111.63 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 86 | 111.71 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 88 | 111.74 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 91 | 111.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 95 | 111.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 97 | 111.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 99 | 111.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 133 | 112.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 140 | 112.08 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 150 | 112.18 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 156 | 112.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 166 | 112.25 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 168 | 112.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 169 | 112.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 177 | 112.34 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 189 | 112.39 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 196 | 112.42 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 205 | 112.45 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 207 | 112.45 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 218 | 112.49 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 240 | 112.57 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 280 | 112.66 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 301 | 112.73 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 345 | 112.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 21 |
| 357 | 112.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 381 | 112.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 393 | 112.95 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 409 | 112.98 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 490 | 113.14 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 491 | 113.14 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 492 | 113.14 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 533 | 113.19 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 537 | 113.21 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 540 | 113.22 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 562 | 113.25 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 606 | 113.35 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 610 | 113.36 | temperature | 20.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 635 | 113.41 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 648 | 113.43 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 652 | 113.44 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 659 | 113.45 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 670 | 113.47 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 677 | 113.49 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 688 | 113.51 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 692 | 113.52 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 697 | 113.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 708 | 113.55 | temperature | 30.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 740 | 113.60 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 749 | 113.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 756 | 113.62 | temperature | 30.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 766 | 113.63 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 781 | 113.65 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 795 | 113.67 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 881 | 113.75 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 886 | 113.76 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 901 | 113.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 902 | 113.76 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 913 | 113.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 948 | 113.83 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 949 | 113.83 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 955 | 113.83 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 957 | 113.84 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 4 |