Os08g0266600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nitrous oxide reductase, N-terminal domain containing protein.
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Os08g0266600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nitrous oxide reductase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.61 | 0.338 | 10.4 | 0.776 | 0.601 | -0.767 | -0.692 | -0.715 | -0.276 | 12.4 | 21.83 | 10 | -- | -- |
| 51.51 | 0.337 | 10.4 | 0.774 | 0.624 | -0.757 | -0.00661 | -- | -0.269 | 12.5 | 21.83 | 10 | -- | -- |
| 51.32 | 0.336 | 10.4 | 0.767 | 0.626 | -0.753 | -- | -0.19 | -0.27 | 12.5 | 21.83 | 10 | -- | -- |
| 51.51 | 0.336 | 10.4 | 0.773 | 0.624 | -0.757 | -- | -- | -0.269 | 12.5 | 21.83 | 10 | -- | -- |
| 55.67 | 0.348 | 10.4 | 0.736 | -- | -1.17 | -- | 0.0128 | -0.337 | -- | 13.85 | 10 | -- | -- |
| 62.7 | 0.371 | 10.4 | 0.796 | 1.37 | -- | 0.11 | -- | -0.265 | 12.2 | -- | -- | -- | -- |
| 62.75 | 0.371 | 10.4 | 0.8 | 1.37 | -- | -- | -- | -0.265 | 12.2 | -- | -- | -- | -- |
| 55.42 | 0.347 | 10.4 | 0.782 | -- | -1.17 | -- | -- | -0.301 | -- | 13.09 | 10 | -- | -- |
| 67.24 | 0.384 | 10.4 | -- | 0.576 | -0.794 | -- | -- | -0.355 | 12.4 | 21.83 | 10 | -- | -- |
| 181.54 | 0.63 | 10.4 | 0.756 | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
| 79.64 | 0.417 | 10.4 | -- | 1.36 | -- | -- | -- | -0.354 | 12.1 | -- | -- | -- | -- |
| 71.44 | 0.394 | 10.4 | -- | -- | -1.18 | -- | -- | -0.385 | -- | 14.22 | 10 | -- | -- |
| 196.62 | 0.654 | 10.4 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.49 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 2 | 44.00 | radiation | 20.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 5 | 44.18 | radiation | 10.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 8 | 44.32 | radiation | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 17 | 44.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 18 | 44.72 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 20 | 44.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 40 | 45.29 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 16 |
| 57 | 45.55 | radiation | 10.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 58 | 45.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 75 | 45.76 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 89 | 45.98 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 114 | 46.25 | radiation | 1.0 | 270 | < th | dose independent | sin | 9 | NA |
| 127 | 46.37 | radiation | 1.0 | 270 | > th | dose independent | sin | 9 | NA |
| 146 | 46.47 | radiation | 1.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 162 | 46.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 18 |
| 165 | 46.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 168 | 46.59 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 171 | 46.60 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 206 | 46.86 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 281 | 47.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 286 | 47.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 291 | 47.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 294 | 47.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 297 | 47.35 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 314 | 47.46 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 359 | 47.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 376 | 47.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 9 |
| 378 | 47.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 399 | 47.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 400 | 47.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 401 | 47.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 402 | 47.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 405 | 47.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 409 | 47.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 425 | 47.81 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 436 | 47.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 457 | 47.97 | humidity | 90.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 461 | 47.98 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 477 | 48.04 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 499 | 48.11 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 524 | 48.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 16 |
| 527 | 48.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 530 | 48.19 | humidity | 60.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 532 | 48.20 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 545 | 48.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 6 |
| 557 | 48.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 558 | 48.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 568 | 48.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 587 | 48.35 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 598 | 48.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 608 | 48.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 6 |
| 611 | 48.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 621 | 48.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 631 | 48.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 640 | 48.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 650 | 48.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 653 | 48.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 6 |
| 673 | 48.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 674 | 48.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 6 |
| 676 | 48.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 703 | 48.61 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 704 | 48.61 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 705 | 48.61 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 8 |
| 709 | 48.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 716 | 48.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 717 | 48.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 725 | 48.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 727 | 48.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 729 | 48.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 765 | 48.79 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 771 | 48.79 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 779 | 48.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 782 | 48.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 807 | 48.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 815 | 48.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 822 | 48.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 823 | 48.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 932 | 49.20 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 987 | 49.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 9 |