Os08g0264700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os08g0264700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 232.44 | 0.716 | 2.97 | -0.288 | 0.244 | 5.55 | -0.472 | -19 | -0.0687 | 1.04 | 4.714 | 77 | 12.4 | 1.18 |
| 279.4 | 0.779 | 2.94 | -0.222 | 0.121 | 6.21 | 0.121 | -- | -0.0629 | 0.952 | 0.1229 | 78 | 12.8 | 0.998 |
| 232.71 | 0.71 | 2.98 | -0.237 | 0.229 | 5.82 | -- | -19.4 | -0.0835 | 1.06 | 4.528 | 77 | 12.5 | 1.17 |
| 279.19 | 0.778 | 2.95 | -0.209 | 0.114 | 5.97 | -- | -- | -0.0975 | 23.8 | 0.2064 | 97 | 12.8 | 0.963 |
| 235.16 | 0.714 | 2.97 | -0.252 | -- | 5.81 | -- | -20.4 | -0.0361 | -- | 4.389 | 74 | 12.6 | 1.03 |
| 313.69 | 0.83 | 2.95 | -0.237 | 0.04 | -- | -0.706 | -- | -0.113 | 18 | -- | -- | -- | -- |
| 314.55 | 0.831 | 2.95 | -0.233 | 0.0833 | -- | -- | -- | -0.116 | 22.3 | -- | -- | -- | -- |
| 280 | 0.779 | 2.95 | -0.206 | -- | 5.92 | -- | -- | -0.0965 | -- | 0.2445 | 50 | 12.5 | 3.22 |
| 280.34 | 0.78 | 2.95 | -- | 0.112 | 5.99 | -- | -- | -0.0746 | 23.7 | 0.07419 | 92 | 12.8 | 1.32 |
| 314.98 | 0.829 | 2.95 | -0.232 | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
| 315.99 | 0.832 | 2.95 | -- | 0.0822 | -- | -- | -- | -0.0903 | 22.1 | -- | -- | -- | -- |
| 281.11 | 0.781 | 2.94 | -- | -- | 5.95 | -- | -- | -0.0737 | -- | 0.1618 | 52 | 12.5 | 4.03 |
| 316.4 | 0.83 | 2.95 | -- | -- | -- | -- | -- | -0.0903 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.73 | wind | 5.0 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 3 | 242.05 | wind | 3.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 70 | 274.50 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 2 |
| 85 | 276.81 | radiation | 1.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 88 | 277.39 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 23 |
| 89 | 277.39 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 94 | 278.17 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 4 |
| 96 | 278.40 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 100 | 278.60 | radiation | 40.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 108 | 279.51 | humidity | 90.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 109 | 279.52 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 117 | 280.19 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 118 | 280.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 121 | 280.21 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 123 | 280.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 124 | 280.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 1 |
| 125 | 280.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 1 |
| 126 | 280.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 130 | 280.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 141 | 280.34 | humidity | 50.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 149 | 281.20 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 171 | 282.68 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 173 | 282.83 | humidity | 50.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 174 | 282.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 179 | 283.08 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 13 | 1 |
| 201 | 284.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 206 | 284.38 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 236 | 284.99 | wind | 5.0 | 90 | < th | dose independent | rect. | 12 | 15 |
| 237 | 285.01 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 244 | 285.32 | wind | 5.0 | 90 | < th | dose independent | rect. | 12 | 18 |
| 251 | 285.48 | wind | 9.0 | 90 | < th | dose dependent | rect. | 12 | 15 |
| 258 | 285.77 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 2 |
| 328 | 287.88 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 6 |
| 365 | 288.40 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 380 | 288.81 | wind | 9.0 | 90 | < th | dose dependent | rect. | 23 | 15 |
| 399 | 288.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 416 | 289.23 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 3 |
| 424 | 289.23 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 458 | 289.35 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 468 | 289.35 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 478 | 289.39 | wind | 9.0 | 90 | < th | dose dependent | rect. | 12 | 17 |
| 480 | 289.41 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 12 | 3 |
| 484 | 289.43 | temperature | 20.0 | 30 | < th | dose independent | rect. | 12 | 2 |
| 487 | 289.45 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 3 |
| 489 | 289.45 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 491 | 289.54 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 529 | 290.01 | wind | 7.0 | 10 | < th | dose independent | rect. | 13 | 15 |
| 586 | 290.50 | wind | 5.0 | 270 | < th | dose independent | rect. | 10 | 18 |
| 593 | 290.57 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 2 |
| 594 | 290.57 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 595 | 290.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 609 | 290.80 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 15 |
| 653 | 291.38 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 692 | 292.15 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 719 | 292.61 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 738 | 292.82 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 739 | 292.83 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 23 |
| 741 | 292.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 743 | 292.87 | wind | 9.0 | 270 | < th | dose dependent | rect. | 10 | 17 |
| 792 | 293.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 845 | 293.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 21 |
| 865 | 293.94 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 878 | 294.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 23 |
| 879 | 294.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 931 | 294.49 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 962 | 294.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 23 |
| 964 | 294.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 971 | 294.90 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 988 | 295.04 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 24 | 9 |