Os08g0263400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0263400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.28 | 0.517 | 2.82 | 0.0979 | 0.0189 | 0.938 | -0.684 | 7.47 | 0.0261 | 4.08 | 11.46 | 4270 | -- | -- |
| 124.89 | 0.52 | 2.79 | -0.0893 | 0.0388 | 2.06 | 0.807 | -- | 0.0126 | 15.9 | 11.56 | 4221 | -- | -- |
| 122.12 | 0.515 | 2.83 | 0.172 | 0.0368 | 0.891 | -- | 7.16 | 0.0185 | 8.04 | 11.4 | 4256 | -- | -- |
| 125.62 | 0.522 | 2.82 | -0.0939 | 0.000492 | 2.31 | -- | -- | -0.00296 | 16 | 11.55 | 4221 | -- | -- |
| 122.19 | 0.515 | 2.83 | 0.177 | -- | 0.912 | -- | 7.07 | 0.0156 | -- | 11.4 | 4257 | -- | -- |
| 140.44 | 0.556 | 2.81 | -0.0627 | 0.0796 | -- | 0.709 | -- | 0.0358 | 14.1 | -- | -- | -- | -- |
| 141.84 | 0.558 | 2.8 | -0.043 | 0.121 | -- | -- | -- | 0.0386 | 10.5 | -- | -- | -- | -- |
| 125.62 | 0.522 | 2.82 | -0.0936 | -- | 2.31 | -- | -- | -0.00264 | -- | 11.55 | 4222 | -- | -- |
| 125.85 | 0.522 | 2.81 | -- | 0.0113 | 2.29 | -- | -- | 0.00818 | 15.2 | 11.55 | 4280 | -- | -- |
| 142.74 | 0.558 | 2.81 | -0.0452 | -- | -- | -- | -- | 0.038 | -- | -- | -- | -- | -- |
| 141.89 | 0.557 | 2.8 | -- | 0.121 | -- | -- | -- | 0.0434 | 10.6 | -- | -- | -- | -- |
| 125.85 | 0.522 | 2.81 | -- | -- | 2.3 | -- | -- | 0.00794 | -- | 11.55 | 4225 | -- | -- |
| 142.79 | 0.558 | 2.8 | -- | -- | -- | -- | -- | 0.043 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 2 | 125.50 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 21 | 125.67 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 39 | 126.19 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 40 | 126.20 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 4 |
| 53 | 126.32 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 57 | 126.42 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 63 | 126.52 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 83 | 126.86 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 2 | 12 |
| 132 | 127.08 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 139 | 127.28 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 145 | 127.42 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 146 | 127.45 | wind | 5.0 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 150 | 127.58 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 153 | 127.63 | wind | 5.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 173 | 127.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 174 | 128.04 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 191 | 128.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 206 | 128.46 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 208 | 128.50 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 214 | 128.58 | wind | 5.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 245 | 128.60 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 246 | 128.63 | wind | 5.0 | 10 | > th | dose independent | rect. | 12 | 2 |
| 252 | 128.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 255 | 128.67 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 259 | 128.67 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 261 | 128.67 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 266 | 128.67 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 267 | 128.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 268 | 128.67 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 273 | 128.67 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 297 | 128.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 299 | 128.89 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 305 | 129.01 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 320 | 129.36 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 343 | 129.83 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 352 | 130.07 | wind | 5.0 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 358 | 130.34 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 7 |
| 365 | 130.57 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 370 | 130.68 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 372 | 130.79 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 384 | 131.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 385 | 131.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 393 | 131.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 409 | 131.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 410 | 131.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 413 | 131.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 417 | 131.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 426 | 131.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 427 | 131.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 447 | 131.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 456 | 131.42 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 457 | 131.45 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 468 | 131.58 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 470 | 131.68 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 477 | 131.69 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 526 | 132.22 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 579 | 132.94 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 609 | 133.14 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 621 | 133.14 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 634 | 133.17 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 656 | 133.37 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 682 | 133.47 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 691 | 133.48 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 702 | 133.60 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 705 | 133.64 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 711 | 133.65 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 735 | 133.81 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 753 | 133.86 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 759 | 133.88 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 791 | 133.99 | wind | 9.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 810 | 134.05 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 812 | 134.06 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 10 |
| 819 | 134.08 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 823 | 134.08 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 6 |
| 827 | 134.09 | wind | 9.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 834 | 134.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 851 | 134.19 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 1 | NA |
| 880 | 134.28 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 882 | 134.28 | wind | 9.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 886 | 134.29 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 896 | 134.32 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 899 | 134.33 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 905 | 134.34 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 907 | 134.35 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 2 | NA |
| 947 | 134.44 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 20 |
| 989 | 134.50 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 19 |
| 994 | 134.50 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 19 |