Os08g0263000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450-like protein (CYP86B1).
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Os08g0263000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450-like protein (CYP86B1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.36 | 0.584 | 3.3 | 0.0793 | 0.241 | 0.959 | 0.801 | -0.177 | -0.0851 | 8.01 | 23.63 | 650 | -- | -- |
| 154.39 | 0.579 | 3.3 | 0.0603 | 0.239 | 0.995 | 0.751 | -- | -0.0903 | 8.02 | 23.49 | 639 | -- | -- |
| 155.45 | 0.581 | 3.31 | 0.0233 | 0.253 | 1.13 | -- | 0.491 | -0.107 | 9.43 | 23.18 | 540 | -- | -- |
| 155.65 | 0.581 | 3.3 | 0.0734 | 0.25 | 0.99 | -- | -- | -0.0977 | 9.32 | 23.4 | 560 | -- | -- |
| 158.88 | 0.587 | 3.31 | 0.0315 | -- | 1.17 | -- | 0.489 | -0.0906 | -- | 23.3 | 586 | -- | -- |
| 167.32 | 0.606 | 3.34 | -0.202 | 0.349 | -- | 0.6 | -- | -0.263 | 8.68 | -- | -- | -- | -- |
| 168.38 | 0.608 | 3.34 | -0.18 | 0.346 | -- | -- | -- | -0.261 | 9.19 | -- | -- | -- | -- |
| 159.12 | 0.588 | 3.31 | 0.0991 | -- | 1.08 | -- | -- | -0.074 | -- | 23.57 | 614 | -- | -- |
| 155.77 | 0.581 | 3.31 | -- | 0.256 | 0.958 | -- | -- | -0.109 | 9.36 | 23.4 | 557 | -- | -- |
| 175.33 | 0.619 | 3.35 | -0.181 | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
| 169.24 | 0.609 | 3.33 | -- | 0.346 | -- | -- | -- | -0.241 | 9.23 | -- | -- | -- | -- |
| 159.36 | 0.588 | 3.31 | -- | -- | 1.03 | -- | -- | -0.0907 | -- | 23.6 | 613 | -- | -- |
| 176.2 | 0.62 | 3.34 | -- | -- | -- | -- | -- | -0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.03 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 3 |
| 2 | 152.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 7 | 152.42 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 20 | 153.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 22 | 153.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 28 | 153.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 36 | 153.60 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 41 | 153.66 | temperature | 25 | 90 | < th | dose independent | rect. | 10 | 1 |
| 55 | 153.84 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 70 | 153.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 74 | 153.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 83 | 154.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 86 | 154.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 182 | 154.56 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 215 | 154.79 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 253 | 154.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 277 | 155.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 287 | 155.13 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 3 |
| 288 | 155.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 289 | 155.13 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 315 | 155.26 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 14 |
| 319 | 155.27 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 424 | 155.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 452 | 155.77 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 3 |
| 455 | 155.77 | temperature | 25 | 270 | < th | dose dependent | sin | 1 | NA |
| 463 | 155.80 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 523 | 156.00 | atmosphere | 1010 | 270 | > th | dose independent | rect. | 8 | 1 |
| 525 | 156.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 570 | 156.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 18 |
| 578 | 156.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 638 | 156.32 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 5 |
| 645 | 156.33 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 14 |
| 696 | 156.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 750 | 156.57 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 1 |
| 773 | 156.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 833 | 156.75 | radiation | 1 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 873 | 156.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 962 | 157.01 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 15 |