FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0262500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0368) R2 : 0.00328
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.095 (0.0775) R2dN8 : 0.00424 R2N8 : 0.00328
σ : 0.694
deviance : 220.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
204.33 0.672 2.9 0.481 0.56 -0.911 0.902 0.471 0.0385 17.8 24.49 407 -- --
204.39 0.666 2.91 0.422 0.547 -0.854 0.979 -- 0.0203 17.8 24.41 414 -- --
205.7 0.668 2.88 0.635 0.561 -0.959 -- 1.46 0.0983 18.1 23.98 424 -- --
206.59 0.669 2.91 0.401 0.517 -0.799 -- -- 0.029 18.1 24.1 431 -- --
207.56 0.671 2.86 0.763 -- -0.798 -- 1.06 0.136 -- 13.6 1410 -- --
217.23 0.691 2.92 0.25 0.139 -- 0.608 -- -0.0672 17.4 -- -- -- --
218.04 0.691 2.92 0.247 0.151 -- -- -- -0.0648 18.5 -- -- -- --
208.08 0.672 2.89 0.499 -- -0.804 -- -- 0.0802 -- 14.09 1391 -- --
210.55 0.676 2.92 -- 0.471 -0.7 -- -- -0.035 18.1 24.46 417 -- --
219.22 0.692 2.92 0.243 -- -- -- -- -0.068 -- -- -- -- --
219.65 0.693 2.93 -- 0.147 -- -- -- -0.0924 18.6 -- -- -- --
213.76 0.681 2.9 -- -- -0.594 -- -- -0.00656 -- 13.38 1367 -- --
220.78 0.694 2.92 -- -- -- -- -- -0.095 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 196.50 radiation 10.0 43200 < th dose dependent rect. 1 1
2 197.42 atmosphere 1015.0 1440 > th dose dependent rect. 24 11
5 197.76 atmosphere 1015.0 1440 > th dose independent rect. 24 11
7 197.80 atmosphere 1015.0 1440 < th dose independent rect. 1 10
10 198.01 radiation 1.0 43200 < th dose dependent rect. 22 2
21 198.86 radiation 40.0 720 < th dose independent rect. 2 8
22 198.88 precipitation 0.1 720 > th dose independent rect. 12 2
25 199.01 precipitation 0.1 720 > th dose dependent rect. 12 4
34 199.23 radiation 40.0 720 < th dose independent rect. 18 16
35 199.26 wind 9.0 43200 > th dose dependent rect. 20 1
41 199.47 precipitation 0.1 43200 < th dose independent rect. 17 1
42 199.47 precipitation 0.1 43200 < th dose dependent rect. 17 1
43 199.51 wind 9.0 43200 > th dose independent rect. 20 1
45 199.58 precipitation 0.1 43200 > th dose independent rect. 17 1
47 199.68 wind 1.0 43200 > th dose independent rect. 8 2
50 199.73 humidity 90.0 1440 > th dose dependent rect. 11 8
52 199.81 wind 9.0 43200 < th dose independent rect. 20 1
53 199.83 radiation 1.0 43200 < th dose dependent rect. 22 6
56 199.92 precipitation 0.1 43200 > th dose dependent rect. 17 1
59 199.98 temperature 15.0 720 > th dose independent rect. 12 8
67 200.10 precipitation 0.1 720 > th dose dependent rect. 8 8
70 200.14 atmosphere 995.0 43200 < th dose dependent rect. 15 1
72 200.23 atmosphere 995.0 43200 < th dose dependent rect. 15 7
73 200.25 precipitation 0.1 720 > th dose independent rect. 8 8
75 200.27 humidity 80.0 43200 > th dose independent rect. 23 1
77 200.34 atmosphere 995.0 43200 < th dose independent rect. 15 1
78 200.36 wind 3.0 43200 < th dose dependent rect. 7 3
79 200.39 atmosphere 995.0 43200 > th dose independent rect. 15 1
80 200.41 radiation 1.0 43200 < th dose dependent rect. 1 3
81 200.42 atmosphere 995.0 43200 > th dose independent rect. 14 8
89 200.47 atmosphere 995.0 43200 < th dose independent rect. 14 8
98 200.55 wind 1.0 43200 < th dose dependent rect. 20 1
104 200.58 wind 3.0 43200 > th dose dependent rect. 15 19
127 200.70 atmosphere 995.0 43200 > th dose independent rect. 12 11
137 200.75 atmosphere 1000.0 43200 > th dose independent rect. 22 1
144 200.76 atmosphere 1000.0 43200 < th dose independent rect. 22 1
151 200.77 humidity 90.0 720 > th dose dependent rect. 13 1
183 200.84 atmosphere 1015.0 1440 < th dose independent rect. 11 1
188 200.84 atmosphere 1015.0 1440 < th dose independent rect. 8 4
193 200.85 atmosphere 1015.0 1440 < th dose independent rect. 6 6
197 200.85 wind 5.0 43200 < th dose dependent rect. 5 10
198 200.86 atmosphere 995.0 43200 > th dose independent sin 20 NA
208 200.88 humidity 80.0 43200 > th dose independent rect. 22 10
215 200.90 atmosphere 1015.0 1440 > th dose independent rect. 10 1
233 200.90 atmosphere 1015.0 1440 > th dose dependent rect. 10 1
278 200.96 precipitation 0.1 1440 > th dose dependent rect. 15 2
282 200.97 atmosphere 1010.0 270 > th dose dependent rect. 6 1
289 200.98 atmosphere 1000.0 43200 < th dose independent rect. 12 1
315 201.01 atmosphere 995.0 43200 < th dose independent sin 20 NA
321 201.02 precipitation 0.1 1440 > th dose independent rect. 15 2
325 201.03 atmosphere 995.0 43200 > th dose independent rect. 4 15
341 201.06 atmosphere 995.0 43200 > th dose independent rect. 5 12
343 201.06 wind 3.0 1440 < th dose dependent rect. 3 4
360 201.08 wind 1.0 43200 < th dose independent rect. 8 2
374 201.10 atmosphere 1010.0 270 > th dose independent rect. 5 1
386 201.10 wind 5.0 43200 < th dose independent rect. 14 20
410 201.13 wind 7.0 43200 < th dose dependent sin 2 NA
417 201.14 wind 3.0 43200 > th dose independent rect. 4 11
424 201.15 wind 5.0 43200 < th dose independent rect. 15 17
440 201.17 wind 7.0 43200 < th dose dependent rect. 3 15
444 201.18 wind 3.0 43200 > th dose dependent rect. 18 5
493 201.24 atmosphere 995.0 43200 < th dose independent rect. 4 15
498 201.24 wind 1.0 43200 > th dose dependent rect. 5 11
504 201.25 atmosphere 1000.0 43200 < th dose dependent sin 21 NA
511 201.26 atmosphere 1000.0 43200 > th dose independent rect. 11 1
535 201.27 wind 3.0 43200 > th dose dependent rect. 3 21
556 201.30 atmosphere 995.0 43200 < th dose independent rect. 5 12
567 201.31 wind 5.0 43200 > th dose independent rect. 15 17
568 201.31 wind 5.0 43200 > th dose independent rect. 14 20
572 201.32 humidity 90.0 1440 > th dose independent rect. 11 8
613 201.35 wind 9.0 43200 < th dose dependent rect. 3 19
631 201.37 wind 1.0 43200 > th dose dependent rect. 3 15
647 201.38 wind 9.0 43200 < th dose dependent rect. 15 20
662 201.40 wind 1.0 43200 > th dose dependent sin 2 NA
697 201.43 humidity 80.0 43200 < th dose independent rect. 3 5
736 201.46 wind 3.0 43200 < th dose independent rect. 4 11
759 201.47 atmosphere 1010.0 90 > th dose dependent rect. 8 1
792 201.49 humidity 80.0 43200 > th dose independent rect. 3 5
795 201.49 wind 3.0 43200 > th dose dependent sin 13 NA
806 201.50 temperature 15.0 720 > th dose independent rect. 8 16
852 201.54 precipitation 0.1 1440 < th dose independent rect. 15 2
858 201.54 precipitation 0.1 1440 < th dose dependent rect. 15 2
869 201.55 temperature 15.0 720 > th dose independent rect. 17 7
879 201.56 wind 3.0 43200 < th dose independent rect. 3 13
889 201.57 wind 3.0 43200 > th dose dependent no NA NA
898 201.58 wind 3.0 43200 > th dose independent sin 2 NA
966 201.63 atmosphere 995.0 43200 > th dose independent rect. 18 1