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Os08g0254900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0153) R2 : 0.64
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.866 (0.0402) R2dC : 0.368 R2C : 0.307
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.584 (0.0323) R2dN8 : 0.334 R2N8 : 0.272
σ : 0.289
deviance : 38.22
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.01 0.27 11.6 -0.104 0.838 0.297 0.183 0.913 -0.631 17.9 32.09 1731 -- --
34.07 0.272 11.6 -0.154 0.846 0.305 0.303 -- -0.647 17.7 34.61 1440 -- --
33.08 0.268 11.6 -0.101 0.835 0.298 -- 0.956 -0.63 17.9 32.09 1747 -- --
34.17 0.272 11.6 -0.172 0.844 0.316 -- -- -0.653 17.7 34.6 1428 -- --
36.54 0.282 11.6 -0.0563 -- 1.01 -- 1.08 -0.579 -- 5.96 726 -- --
37.48 0.287 11.6 -0.154 0.862 -- 0.206 -- -0.602 17.8 -- -- -- --
37.58 0.287 11.6 -0.155 0.863 -- -- -- -0.601 17.8 -- -- -- --
35.24 0.276 11.6 -0.161 -- 1.1 -- -- -0.624 -- 5.892 726 -- --
35.28 0.277 11.6 -- 0.857 0.311 -- -- -0.649 17.7 34.67 1422 -- --
76.24 0.408 11.6 -0.182 -- -- -- -- -0.621 -- -- -- -- --
38.22 0.289 11.6 -- 0.866 -- -- -- -0.584 17.8 -- -- -- --
35.63 0.278 11.6 -- -- 1.1 -- -- -0.636 -- 6.284 724 -- --
77.11 0.41 11.6 -- -- -- -- -- -0.601 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.45 wind 3.0 1440 < th dose dependent rect. 5 2
2 31.72 wind 5.0 14400 > th dose independent rect. 7 2
4 31.78 wind 5.0 14400 < th dose independent rect. 7 2
6 31.94 wind 5.0 14400 > th dose dependent rect. 7 2
19 32.16 humidity 80.0 43200 > th dose independent rect. 23 1
20 32.17 wind 7.0 43200 < th dose dependent rect. 6 2
52 32.35 humidity 80.0 43200 > th dose independent rect. 23 8
59 32.39 humidity 80.0 43200 > th dose independent rect. 4 3
73 32.42 humidity 80.0 43200 < th dose independent rect. 22 10
76 32.43 temperature 20.0 14400 > th dose independent rect. 20 1
80 32.44 humidity 80.0 43200 < th dose independent rect. 23 1
91 32.44 humidity 90.0 14400 > th dose dependent rect. 9 1
92 32.45 temperature 20.0 14400 < th dose independent rect. 20 2
103 32.46 wind 9.0 1440 < th dose dependent rect. 5 2
105 32.46 humidity 80.0 43200 < th dose dependent rect. 1 7
106 32.47 radiation 30.0 1440 > th dose independent rect. 9 1
113 32.48 humidity 80.0 43200 < th dose independent rect. 3 4
152 32.55 radiation 30.0 1440 < th dose independent rect. 9 1
166 32.56 humidity 90.0 43200 < th dose independent rect. 1 3
220 32.61 wind 9.0 43200 > th dose dependent rect. 20 12
234 32.64 humidity 80.0 14400 > th dose independent rect. 16 2
265 32.68 humidity 80.0 14400 < th dose independent rect. 16 1
271 32.69 radiation 40.0 720 < th dose independent rect. 9 4
274 32.69 humidity 90.0 14400 > th dose dependent rect. 21 1
282 32.70 humidity 80.0 14400 > th dose dependent rect. 18 1
289 32.71 wind 9.0 43200 > th dose dependent sin 12 NA
294 32.72 humidity 80.0 43200 < th dose dependent rect. 22 1
314 32.74 wind 1.0 1440 > th dose dependent rect. 5 2
321 32.75 wind 9.0 43200 > th dose dependent rect. 20 9
351 32.79 wind 9.0 43200 > th dose independent rect. 20 9
357 32.79 precipitation 0.1 43200 > th dose dependent rect. 16 4
364 32.80 wind 9.0 43200 > th dose independent rect. 20 11
374 32.80 wind 9.0 43200 > th dose dependent rect. 17 15
402 32.82 humidity 90.0 14400 > th dose dependent rect. 7 16
416 32.84 humidity 90.0 14400 > th dose independent rect. 9 1
426 32.85 humidity 80.0 14400 > th dose independent rect. 12 7
445 32.86 wind 9.0 43200 > th dose independent rect. 17 18
446 32.86 wind 9.0 43200 < th dose independent rect. 20 18
459 32.87 radiation 40.0 720 < th dose independent rect. 18 18
464 32.87 temperature 10.0 720 > th dose dependent rect. 8 7
470 32.88 humidity 90.0 14400 < th dose independent rect. 20 2
472 32.88 wind 1.0 1440 < th dose independent rect. 4 3
483 32.88 humidity 80.0 43200 < th dose dependent rect. 22 5
494 32.89 humidity 80.0 14400 < th dose independent rect. 13 5
505 32.89 humidity 90.0 14400 > th dose dependent rect. 7 4
512 32.89 atmosphere 995.0 43200 < th dose dependent rect. 10 13
522 32.90 humidity 80.0 43200 < th dose dependent rect. 2 1
546 32.91 wind 9.0 43200 > th dose dependent rect. 17 22
556 32.92 wind 9.0 43200 < th dose independent rect. 20 9
559 32.92 wind 9.0 43200 < th dose independent rect. 20 12
560 32.92 wind 9.0 43200 < th dose independent rect. 17 21
583 32.93 wind 9.0 43200 < th dose independent rect. 17 18
584 32.93 radiation 30.0 1440 > th dose independent rect. 16 20
619 32.94 atmosphere 995.0 43200 < th dose dependent sin 21 NA
673 32.95 radiation 20.0 270 > th dose dependent rect. 13 22
680 32.96 precipitation 0.1 14400 > th dose independent rect. 7 9
685 32.96 wind 9.0 43200 > th dose independent rect. 20 18
706 32.97 precipitation 0.1 14400 < th dose independent rect. 7 9
708 32.97 wind 9.0 43200 > th dose independent rect. 17 16
719 32.97 precipitation 0.1 14400 < th dose dependent rect. 7 9
724 32.97 wind 7.0 43200 > th dose dependent rect. 19 20
725 32.98 wind 3.0 43200 > th dose independent sin 5 NA
746 32.98 humidity 90.0 14400 > th dose dependent rect. 7 7
767 32.99 radiation 30.0 1440 < th dose independent rect. 22 14
772 32.99 wind 9.0 43200 > th dose independent rect. 17 21
777 32.99 atmosphere 995.0 43200 < th dose dependent rect. 11 5
789 33.00 atmosphere 995.0 43200 > th dose independent rect. 10 3
796 33.00 wind 9.0 43200 > th dose independent rect. 20 16
799 33.00 humidity 80.0 43200 > th dose dependent rect. 20 8
807 33.00 wind 9.0 43200 > th dose dependent rect. 19 23
808 33.01 wind 9.0 43200 > th dose independent sin 11 NA
811 33.01 wind 9.0 43200 > th dose independent rect. 20 4
814 33.01 precipitation 0.1 14400 > th dose independent rect. 7 7
823 33.01 humidity 90.0 14400 > th dose independent rect. 9 14
831 33.01 wind 9.0 43200 > th dose dependent rect. 20 4
847 33.01 wind 3.0 43200 > th dose dependent rect. 3 13
851 33.02 wind 1.0 1440 > th dose independent rect. 4 3
858 33.02 humidity 90.0 14400 < th dose independent rect. 10 12
872 33.03 radiation 40.0 720 > th dose independent sin 10 NA
888 33.03 precipitation 0.1 14400 < th dose independent rect. 6 12
899 33.03 humidity 90.0 14400 > th dose dependent sin 22 NA
900 33.03 wind 7.0 43200 > th dose dependent rect. 19 1
901 33.03 precipitation 0.1 43200 > th dose dependent rect. 13 5
906 33.03 precipitation 0.1 14400 < th dose dependent rect. 6 12
917 33.04 humidity 90.0 14400 < th dose independent rect. 17 5
936 33.04 atmosphere 995.0 43200 < th dose dependent rect. 10 7
940 33.04 humidity 90.0 14400 > th dose dependent rect. 7 9
946 33.05 temperature 20.0 14400 > th dose independent sin 17 NA
957 33.05 precipitation 0.1 14400 > th dose independent rect. 6 12
962 33.05 wind 3.0 43200 > th dose dependent sin 3 NA
963 33.05 radiation 20.0 1440 > th dose dependent rect. 9 1
976 33.05 wind 3.0 43200 > th dose dependent rect. 17 17
978 33.05 wind 9.0 43200 > th dose dependent rect. 14 19
982 33.06 wind 3.0 43200 < th dose independent sin 5 NA
996 33.06 atmosphere 995.0 43200 < th dose dependent rect. 13 2