Os08g0254200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0254200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.89 | 0.376 | 9.12 | -0.272 | 0.391 | -1.23 | 0.682 | -1.06 | 0.549 | 4.68 | 24.37 | 11 | -- | -- |
| 65.36 | 0.379 | 9.13 | -0.412 | 0.39 | -1.1 | 0.364 | -- | 0.518 | 5.18 | 24.48 | 2 | -- | -- |
| 64.15 | 0.376 | 9.11 | -0.295 | 0.381 | -1.3 | -- | -0.965 | 0.57 | 5.31 | 23.24 | 16 | -- | -- |
| 65.56 | 0.38 | 9.13 | -0.401 | 0.374 | -1.16 | -- | -- | 0.548 | 5.45 | 23.4 | 3 | -- | -- |
| 71.51 | 0.396 | 9.12 | -0.274 | -- | -1.21 | -- | -0.885 | 0.591 | -- | 23.15 | 9 | -- | -- |
| 83.04 | 0.427 | 9.09 | -0.157 | 0.355 | -- | 0.0288 | -- | 0.713 | 7.35 | -- | -- | -- | -- |
| 83.05 | 0.427 | 9.09 | -0.156 | 0.355 | -- | -- | -- | 0.713 | 7.37 | -- | -- | -- | -- |
| 72.73 | 0.399 | 9.13 | -0.371 | -- | -1.1 | -- | -- | 0.573 | -- | 23.15 | 9 | -- | -- |
| 69.44 | 0.39 | 9.11 | -- | 0.36 | -1.01 | -- | -- | 0.613 | 5.74 | 23.3 | 5 | -- | -- |
| 89.75 | 0.443 | 9.1 | -0.151 | -- | -- | -- | -- | 0.719 | -- | -- | -- | -- | -- |
| 83.69 | 0.428 | 9.08 | -- | 0.354 | -- | -- | -- | 0.73 | 7.4 | -- | -- | -- | -- |
| 76.1 | 0.408 | 9.12 | -- | -- | -0.968 | -- | -- | 0.628 | -- | 23.2 | 5 | -- | -- |
| 90.35 | 0.444 | 9.09 | -- | -- | -- | -- | -- | 0.735 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 2 | 61.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 95 | 64.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 97 | 64.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 102 | 64.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 103 | 64.27 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 105 | 64.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 106 | 64.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 108 | 64.33 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 111 | 64.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 120 | 64.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 140 | 64.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 154 | 64.99 | temperature | 25 | 10 | < th | dose dependent | sin | 12 | NA |
| 160 | 65.04 | temperature | 25 | 90 | < th | dose dependent | sin | 12 | NA |
| 187 | 65.24 | temperature | 25 | 270 | < th | dose dependent | sin | 15 | NA |
| 195 | 65.33 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 349 | 66.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 13 |
| 353 | 66.38 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 443 | 67.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 449 | 67.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 505 | 67.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 527 | 67.62 | temperature | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 592 | 67.98 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 19 |
| 624 | 68.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 628 | 68.16 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 637 | 68.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 693 | 68.35 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 712 | 68.45 | temperature | 20 | 10 | > th | dose independent | sin | 10 | NA |
| 773 | 68.68 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 20 |
| 804 | 68.80 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 854 | 69.00 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 19 |
| 861 | 69.02 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 881 | 69.06 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 885 | 69.07 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 895 | 69.10 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 896 | 69.11 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 925 | 69.18 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 948 | 69.25 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 952 | 69.26 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 955 | 69.28 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 12 |