Os08g0249000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, B-box domain containing protein.
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Os08g0249000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, B-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 351.38 | 0.881 | 10.1 | -0.75 | 0.626 | -8.88 | 2.17 | -0.397 | -0.231 | 7.08 | 0.6793 | 97 | 8.76 | -- |
| 351.69 | 0.873 | 10.1 | -0.782 | 0.621 | -8.87 | 2.44 | -- | -0.233 | 7.31 | 0.68 | 96 | 8.76 | -- |
| 361.17 | 0.885 | 10.1 | -0.675 | 0.792 | -8.65 | -- | -0.902 | -0.213 | 8.02 | 0.6517 | 96 | 8.75 | -- |
| 367.15 | 0.892 | 10.1 | -0.7 | 0.675 | -8.83 | -- | -- | -0.244 | 7.14 | 0.7323 | 97 | 8.72 | -- |
| 372.38 | 0.899 | 10.2 | -0.686 | -- | -9.15 | -- | -1.18 | -0.228 | -- | 0.8004 | 96 | 9 | -- |
| 1162.66 | 1.6 | 9.87 | -0.283 | 9.09 | -- | 0.921 | -- | 0.131 | 11.3 | -- | -- | -- | -- |
| 1166.3 | 1.6 | 9.87 | -0.245 | 9.09 | -- | -- | -- | 0.135 | 11.3 | -- | -- | -- | -- |
| 378.77 | 0.906 | 10.2 | -0.722 | -- | -9.14 | -- | -- | -0.231 | -- | 0.8158 | 96 | 8.98 | -- |
| 379.94 | 0.908 | 10.1 | -- | 0.728 | -8.72 | -- | -- | -0.16 | 7.6 | 0.7759 | 97 | 8.7 | -- |
| 6335.1 | 3.72 | 10.1 | -0.471 | -- | -- | -- | -- | 0.0503 | -- | -- | -- | -- | -- |
| 1167.88 | 1.6 | 9.86 | -- | 9.09 | -- | -- | -- | 0.162 | 11.3 | -- | -- | -- | -- |
| 392.23 | 0.922 | 10.1 | -- | -- | -9.1 | -- | -- | -0.15 | -- | 0.9134 | 94 | 8.91 | -- |
| 6340.96 | 3.72 | 10.1 | -- | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 365.94 | radiation | 1.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 3 | 398.71 | radiation | 1.0 | 90 | < th | dose independent | sin | 14 | NA |
| 4 | 399.93 | radiation | 1.0 | 90 | > th | dose independent | sin | 14 | NA |
| 8 | 462.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 9 | 462.70 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 16 |
| 14 | 473.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 17 | 475.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 24 | 481.84 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 30 | 489.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 32 | 491.85 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 34 | 493.61 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 36 | 494.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 40 | 495.86 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 43 | 497.19 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 62 | 502.47 | humidity | 60.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 68 | 507.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 6 |
| 69 | 507.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 71 | 511.09 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 74 | 512.58 | radiation | 1.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 90 | 517.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 4 |
| 91 | 517.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 4 |
| 94 | 520.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 7 |
| 95 | 520.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 96 | 521.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 102 | 524.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 109 | 525.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 111 | 525.23 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 113 | 525.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 116 | 525.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 117 | 525.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 118 | 525.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 121 | 526.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 122 | 526.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 142 | 530.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 144 | 531.26 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 148 | 531.26 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 149 | 531.26 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 167 | 535.19 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 174 | 535.74 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 176 | 536.13 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 18 |
| 183 | 536.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 186 | 536.74 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 188 | 537.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 198 | 540.11 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 206 | 541.20 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 210 | 542.20 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 222 | 543.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 234 | 545.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 238 | 545.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 239 | 545.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 247 | 546.88 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 18 |
| 248 | 547.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 260 | 547.92 | radiation | 1.0 | 270 | > th | dose independent | sin | 18 | NA |
| 263 | 548.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 264 | 548.25 | humidity | 90.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 281 | 549.02 | radiation | 1.0 | 270 | < th | dose independent | sin | 18 | NA |
| 282 | 549.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 337 | 557.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 340 | 557.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 352 | 558.21 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 364 | 559.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 396 | 561.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 397 | 561.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 398 | 561.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 399 | 561.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 400 | 561.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 407 | 562.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 408 | 562.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 426 | 564.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 429 | 564.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 432 | 564.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 436 | 564.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 18 |
| 437 | 564.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 454 | 566.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 495 | 569.24 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 513 | 572.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 20 |
| 514 | 572.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 555 | 576.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 572 | 578.85 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 610 | 581.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 620 | 582.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 634 | 583.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 635 | 583.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 636 | 583.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 639 | 584.33 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 642 | 584.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 643 | 584.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 644 | 584.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 646 | 584.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 648 | 584.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 681 | 589.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 721 | 591.63 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 14 | 5 |
| 764 | 595.16 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 9 |
| 765 | 595.16 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 9 |
| 767 | 595.57 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 818 | 599.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 826 | 599.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 833 | 600.13 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 851 | 601.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 911 | 606.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 918 | 607.05 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 920 | 607.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 921 | 607.18 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 9 |