Os08g0247600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine rich repeat, N-terminal domain containing protein.
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Os08g0247600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine rich repeat, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.23 | 0.817 | 8.2 | -1.07 | 3.5 | 2.48 | 0.12 | -3.3 | 0.0674 | 8.72 | 26.59 | 7354 | 19.6 | -- |
| 315.01 | 0.827 | 8.11 | -0.439 | 3.49 | 2.52 | 0.0663 | -- | 0.176 | 8.7 | 24.9 | 11803 | 20.1 | -- |
| 302.1 | 0.81 | 8.2 | -1.07 | 3.5 | 2.46 | -- | -3.36 | 0.0602 | 8.71 | 26.6 | 7419 | 20.5 | -- |
| 312.75 | 0.824 | 8.09 | -0.272 | 3.5 | 2.64 | -- | -- | 0.243 | 8.81 | 24.8 | 11558 | 13.6 | -- |
| 545.78 | 1.09 | 8.12 | 0.231 | -- | 3.17 | -- | -1.68 | 0.655 | -- | 23.16 | 13 | 21.7 | -- |
| 494.2 | 1.04 | 7.85 | 1.18 | 3.49 | -- | 0.0641 | -- | 1.29 | 8.69 | -- | -- | -- | -- |
| 494.21 | 1.04 | 7.85 | 1.19 | 3.49 | -- | -- | -- | 1.29 | 8.69 | -- | -- | -- | -- |
| 486.42 | 1.03 | 7.96 | 1.1 | -- | 3.48 | -- | -- | 1.27 | -- | 15.21 | 18 | 21.5 | -- |
| 313.88 | 0.825 | 8.08 | -- | 3.64 | 2.48 | -- | -- | 0.314 | 8.86 | 24.84 | 10721 | 13.3 | -- |
| 1183.18 | 1.61 | 7.94 | 1.19 | -- | -- | -- | -- | 1.32 | -- | -- | -- | -- | -- |
| 531.33 | 1.08 | 7.88 | -- | 3.49 | -- | -- | -- | 1.16 | 8.67 | -- | -- | -- | -- |
| 517.02 | 1.06 | 7.98 | -- | -- | 3.52 | -- | -- | 1.14 | -- | 15.2 | 16 | 21.5 | -- |
| 1220.81 | 1.63 | 7.97 | -- | -- | -- | -- | -- | 1.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.73 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 292.47 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 3 | 292.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 6 | 293.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 7 | 293.57 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 12 | 293.85 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 35 | 295.36 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 43 | 295.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 49 | 295.86 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 53 | 296.12 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 92 | 298.05 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 129 | 298.63 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 170 | 299.08 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 222 | 299.57 | temperature | 25 | 14400 | < th | dose independent | sin | 17 | NA |
| 255 | 299.77 | temperature | 25 | 14400 | > th | dose independent | sin | 17 | NA |
| 266 | 299.82 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 281 | 299.89 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 283 | 299.91 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 290 | 299.93 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 292 | 299.94 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 300 | 299.97 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 375 | 300.31 | temperature | 25 | 14400 | > th | dose dependent | sin | 20 | NA |
| 419 | 300.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 420 | 300.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 436 | 300.57 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 19 |
| 447 | 300.59 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 18 |
| 449 | 300.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 492 | 300.70 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 20 |
| 494 | 300.70 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 523 | 300.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 649 | 301.10 | temperature | 25 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 658 | 301.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 673 | 301.15 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 679 | 301.17 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 712 | 301.27 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 735 | 301.35 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 818 | 301.60 | temperature | 20 | 14400 | > th | dose dependent | sin | 4 | NA |
| 839 | 301.66 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 897 | 301.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 976 | 302.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 3 |