Os08g0246800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0246800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.85 | 0.325 | 11.7 | 0.474 | 0.517 | 0.669 | 0.526 | 0.0841 | 0.487 | 22.1 | 21.4 | 1260 | -- | -- |
| 47.63 | 0.321 | 11.7 | 0.468 | 0.516 | 0.638 | 0.521 | -- | 0.476 | 22 | 21.7 | 1243 | -- | -- |
| 48.62 | 0.325 | 11.7 | 0.493 | 0.515 | 0.649 | -- | 0.169 | 0.486 | 21.9 | 21.7 | 1244 | -- | -- |
| 48.69 | 0.325 | 11.7 | 0.443 | 0.513 | 0.641 | -- | -- | 0.476 | 21.9 | 21.77 | 1245 | -- | -- |
| 60.57 | 0.362 | 11.7 | 0.531 | -- | 0.7 | -- | 0.264 | 0.476 | -- | 21.8 | 834 | -- | -- |
| 61.15 | 0.367 | 11.6 | 0.719 | 0.553 | -- | 0.508 | -- | 0.671 | 22.3 | -- | -- | -- | -- |
| 62.17 | 0.369 | 11.6 | 0.699 | 0.552 | -- | -- | -- | 0.67 | 22.2 | -- | -- | -- | -- |
| 60.77 | 0.363 | 11.7 | 0.462 | -- | 0.687 | -- | -- | 0.46 | -- | 21.8 | 833 | -- | -- |
| 53.26 | 0.34 | 11.7 | -- | 0.514 | 0.776 | -- | -- | 0.401 | 21.9 | 21.63 | 1249 | -- | -- |
| 80.63 | 0.42 | 11.6 | 0.707 | -- | -- | -- | -- | 0.672 | -- | -- | -- | -- | -- |
| 75.05 | 0.405 | 11.7 | -- | 0.555 | -- | -- | -- | 0.593 | 22.3 | -- | -- | -- | -- |
| 65.68 | 0.377 | 11.7 | -- | -- | 0.811 | -- | -- | 0.381 | -- | 21.8 | 863 | -- | -- |
| 93.81 | 0.452 | 11.7 | -- | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 2 | 49.17 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 3 | 49.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 5 | 49.18 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 9 | 49.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 11 | 49.20 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 40 | 49.28 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 85 | 49.37 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 102 | 49.40 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 111 | 49.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 119 | 49.41 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 348 | 49.92 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 350 | 49.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 447 | 50.21 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 510 | 50.39 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 521 | 50.42 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 526 | 50.43 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 567 | 50.52 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 581 | 50.55 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 586 | 50.55 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 604 | 50.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 631 | 50.63 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 642 | 50.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 654 | 50.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 673 | 50.68 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 679 | 50.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 683 | 50.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 694 | 50.70 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 708 | 50.71 | temperature | 20.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 709 | 50.71 | temperature | 20.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 715 | 50.71 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 731 | 50.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 776 | 50.76 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 785 | 50.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 788 | 50.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 798 | 50.78 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 21 |
| 816 | 50.80 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 839 | 50.82 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 875 | 50.85 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 879 | 50.85 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 955 | 50.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 22 |