Os08g0246400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14).
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Os08g0246400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2) (CR14).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.38 | 0.317 | 10.5 | -0.803 | 0.838 | 0.677 | -0.665 | -0.378 | -0.347 | 22.6 | 21.4 | 845 | -- | -- |
| 45.75 | 0.315 | 10.4 | -0.721 | 0.839 | 0.695 | -0.733 | -- | -0.327 | 22.7 | 21.4 | 860 | -- | -- |
| 46.95 | 0.319 | 10.5 | -0.841 | 0.845 | 0.665 | -- | -0.647 | -0.356 | 22.7 | 21.3 | 770 | -- | -- |
| 48.24 | 0.323 | 10.4 | -0.688 | 0.84 | 0.714 | -- | -- | -0.324 | 22.6 | 21.22 | 840 | -- | -- |
| 88.2 | 0.437 | 10.5 | -0.899 | -- | 0.928 | -- | -0.568 | -0.416 | -- | 21.31 | 824 | -- | -- |
| 62.05 | 0.369 | 10.4 | -0.455 | 0.96 | -- | -0.826 | -- | -0.135 | 22.6 | -- | -- | -- | -- |
| 64.87 | 0.377 | 10.4 | -0.421 | 0.965 | -- | -- | -- | -0.132 | 22.6 | -- | -- | -- | -- |
| 89.2 | 0.44 | 10.4 | -0.76 | -- | 0.964 | -- | -- | -0.392 | -- | 21.3 | 830 | -- | -- |
| 57.9 | 0.354 | 10.4 | -- | 0.876 | 0.48 | -- | -- | -0.233 | 22.7 | 22.38 | 678 | -- | -- |
| 122.2 | 0.517 | 10.4 | -0.403 | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
| 69.54 | 0.39 | 10.4 | -- | 0.962 | -- | -- | -- | -0.0854 | 22.6 | -- | -- | -- | -- |
| 101.62 | 0.47 | 10.4 | -- | -- | 0.739 | -- | -- | -0.302 | -- | 22.26 | 800 | -- | -- |
| 126.49 | 0.525 | 10.4 | -- | -- | -- | -- | -- | -0.0829 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 4 | 45.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 18 | 45.27 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 46 | 45.55 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 86 | 45.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 122 | 46.01 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 134 | 46.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 162 | 46.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 255 | 46.71 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 330 | 46.99 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 353 | 47.06 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 356 | 47.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 374 | 47.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 410 | 47.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 428 | 47.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 443 | 47.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 464 | 47.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 474 | 47.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 536 | 47.43 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 17 |
| 537 | 47.43 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 601 | 47.49 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 633 | 47.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 634 | 47.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 639 | 47.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 710 | 47.59 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 22 |
| 734 | 47.61 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 8 |
| 794 | 47.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 826 | 47.68 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 19 |
| 858 | 47.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 981 | 47.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 10 |