Os08g0245900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0245900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.93 | 0.558 | 5.76 | 0.578 | 0.352 | -1.73 | 0.752 | 0.719 | 0.473 | 5.16 | 23.91 | 561 | -- | -- |
| 141.24 | 0.554 | 5.74 | 0.691 | 0.36 | -1.92 | 0.855 | -- | 0.517 | 5.08 | 23.2 | 521 | -- | -- |
| 142.17 | 0.555 | 5.76 | 0.552 | 0.372 | -1.73 | -- | 0.945 | 0.47 | 5.01 | 23.82 | 506 | -- | -- |
| 143.04 | 0.557 | 5.74 | 0.685 | 0.374 | -1.94 | -- | -- | 0.515 | 5.03 | 23.21 | 506 | -- | -- |
| 148.45 | 0.567 | 5.77 | 0.567 | -- | -1.64 | -- | 0.874 | 0.481 | -- | 23.94 | 670 | -- | -- |
| 188.21 | 0.643 | 5.67 | 1.17 | 0.276 | -- | 0.767 | -- | 0.824 | 4.08 | -- | -- | -- | -- |
| 189.73 | 0.645 | 5.68 | 1.16 | 0.281 | -- | -- | -- | 0.82 | 3.38 | -- | -- | -- | -- |
| 149.25 | 0.569 | 5.75 | 0.691 | -- | -1.78 | -- | -- | 0.515 | -- | 23.53 | 757 | -- | -- |
| 154 | 0.578 | 5.77 | -- | 0.405 | -2.2 | -- | -- | 0.403 | 5.25 | 23.26 | 534 | -- | -- |
| 194.16 | 0.651 | 5.68 | 1.17 | -- | -- | -- | -- | 0.827 | -- | -- | -- | -- | -- |
| 225.25 | 0.702 | 5.71 | -- | 0.304 | -- | -- | -- | 0.69 | 3.37 | -- | -- | -- | -- |
| 160.08 | 0.589 | 5.77 | -- | -- | -2.11 | -- | -- | 0.399 | -- | 23.38 | 834 | -- | -- |
| 230.44 | 0.709 | 5.71 | -- | -- | -- | -- | -- | 0.697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 3 | 139.12 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 22 | 140.37 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 39 | 140.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 118 | 142.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 144 | 142.66 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 155 | 142.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 158 | 142.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 203 | 143.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 279 | 145.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 8 |
| 366 | 145.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 527 | 146.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 572 | 146.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 593 | 146.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 768 | 147.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 776 | 147.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 797 | 147.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 810 | 147.70 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 20 |
| 976 | 148.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |