Os08g0244500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase-like protein.
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Os08g0244500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.13 | 0.742 | 8.9 | 1.75 | 1.23 | -3.25 | 2.03 | 6.52 | 1.36 | 21.3 | 20.07 | 123 | -- | -- |
| 277.89 | 0.776 | 9.01 | 0.683 | 0.993 | -3.99 | 1.79 | -- | 1.13 | 20.9 | 7.272 | 53 | -- | -- |
| 260.48 | 0.752 | 8.9 | 1.8 | 1.49 | -3.11 | -- | 6.93 | 1.36 | 21.6 | 20.25 | 228 | -- | -- |
| 284.18 | 0.785 | 9.03 | 0.604 | 1.04 | -3.63 | -- | -- | 1.04 | 21.8 | 8.623 | 53 | -- | -- |
| 316.08 | 0.828 | 8.89 | 1.32 | -- | -3.54 | -- | 4.36 | 1.32 | -- | 19.55 | 11 | -- | -- |
| 410.52 | 0.95 | 9.14 | -0.111 | 1.65 | -- | 0.394 | -- | 0.536 | 0.224 | -- | -- | -- | -- |
| 411.15 | 0.95 | 9.14 | -0.127 | 1.65 | -- | -- | -- | 0.533 | 0.287 | -- | -- | -- | -- |
| 331.83 | 0.848 | 8.98 | 0.679 | -- | -3.97 | -- | -- | 1.12 | -- | 15.61 | 7 | -- | -- |
| 292.67 | 0.797 | 9.05 | -- | 1.06 | -3.34 | -- | -- | 0.939 | 22.2 | 5.097 | 48 | -- | -- |
| 581.9 | 1.13 | 9.11 | -0.0727 | -- | -- | -- | -- | 0.559 | -- | -- | -- | -- | -- |
| 411.58 | 0.949 | 9.14 | -- | 1.65 | -- | -- | -- | 0.548 | 0.283 | -- | -- | -- | -- |
| 342.81 | 0.865 | 9.01 | -- | -- | -3.59 | -- | -- | 1.02 | -- | 16.8 | 7 | -- | -- |
| 582.04 | 1.13 | 9.11 | -- | -- | -- | -- | -- | 0.567 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 2 | 243.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 244.25 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 5 | 245.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 6 | 245.75 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 10 | 246.92 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 12 | 247.32 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 16 | 247.68 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 21 | 248.47 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 22 | 248.49 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 25 | 248.67 | radiation | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 36 | 249.43 | radiation | 20 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 46 | 249.44 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 59 | 249.79 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 66 | 250.07 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 94 | 250.69 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 96 | 250.72 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 102 | 250.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 115 | 251.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 136 | 251.63 | radiation | 20 | 43200 | < th | dose independent | sin | 9 | NA |
| 137 | 251.64 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 139 | 251.67 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 194 | 252.52 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 212 | 252.67 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 236 | 252.80 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 370 | 253.84 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 377 | 253.99 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 379 | 254.02 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 498 | 254.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 501 | 254.92 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 522 | 255.07 | radiation | 10 | 43200 | > th | dose dependent | sin | 9 | NA |
| 568 | 255.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 592 | 255.54 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 629 | 255.71 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 632 | 255.78 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 641 | 255.92 | radiation | 40 | 43200 | > th | dose dependent | sin | 9 | NA |
| 667 | 256.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 847 | 256.96 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 853 | 257.06 | radiation | 40 | 43200 | > th | dose independent | sin | 10 | NA |
| 876 | 257.24 | radiation | 30 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 914 | 257.50 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 987 | 257.83 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 10 |
| 996 | 257.84 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 17 |