Os08g0241800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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Os08g0241800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.04 | 0.593 | 6.91 | -0.423 | 2.13 | -2.1 | -1.03 | -0.513 | -0.837 | 7.52 | 0.7712 | 90 | 1.02 | -- |
| 159.5 | 0.588 | 6.91 | -0.423 | 2.08 | -2.11 | -1.05 | -- | -0.827 | 7.37 | 1.222 | 81 | 1.31 | -- |
| 161.92 | 0.593 | 6.92 | -0.422 | 2.13 | -2.14 | -- | -0.477 | -0.845 | 7.38 | 0.9601 | 88 | 1.21 | -- |
| 161.1 | 0.591 | 6.93 | -0.43 | 2.1 | -2.28 | -- | -- | -0.864 | 6.83 | 4.011 | 61 | 1.82 | -- |
| 239.03 | 0.72 | 6.95 | -0.295 | -- | -2.02 | -- | 0.382 | -0.711 | -- | 5.637 | 4 | 5.88 | -- |
| 226.28 | 0.705 | 6.88 | -0.42 | 2.34 | -- | -0.575 | -- | -0.715 | 10.6 | -- | -- | -- | -- |
| 227.64 | 0.707 | 6.88 | -0.442 | 2.34 | -- | -- | -- | -0.716 | 10.7 | -- | -- | -- | -- |
| 236.12 | 0.716 | 6.95 | -0.437 | -- | -2.06 | -- | -- | -0.763 | -- | 8.31 | 8 | 6.43 | -- |
| 165.8 | 0.6 | 6.92 | -- | 2.1 | -2.34 | -- | -- | -0.829 | 6.68 | 4.852 | 55 | 1.89 | -- |
| 565.07 | 1.11 | 6.94 | -0.487 | -- | -- | -- | -- | -0.728 | -- | -- | -- | -- | -- |
| 232.8 | 0.714 | 6.87 | -- | 2.34 | -- | -- | -- | -0.667 | 10.7 | -- | -- | -- | -- |
| 240.59 | 0.725 | 6.94 | -- | -- | -2.07 | -- | -- | -0.704 | -- | 8.529 | 11 | 6.42 | -- |
| 571.32 | 1.12 | 6.93 | -- | -- | -- | -- | -- | -0.674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 2 | 153.04 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 3 | 153.19 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 4 | 153.35 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 5 | 153.45 | wind | 5.0 | 30 | < th | dose dependent | rect. | 24 | 5 |
| 6 | 153.49 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 7 | 153.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 8 | 153.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 11 | 153.71 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 16 | 153.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 17 | 153.90 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 19 | 153.90 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 20 | 153.90 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 24 | 153.90 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 29 | 153.90 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 43 | 154.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 2 |
| 45 | 154.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 46 | 154.65 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 24 | 5 |
| 61 | 154.75 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 2 |
| 64 | 154.81 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 2 |
| 65 | 154.81 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 66 | 154.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 69 | 154.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 2 |
| 70 | 154.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 74 | 154.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 2 |
| 79 | 154.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 80 | 154.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 91 | 155.14 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 94 | 155.40 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 24 | 5 |
| 108 | 155.76 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 110 | 155.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 20 |
| 112 | 155.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 124 | 156.47 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 127 | 156.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 24 | 7 |
| 131 | 156.85 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 138 | 157.10 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 188 | 158.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 22 |
| 189 | 158.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 216 | 159.28 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 218 | 159.31 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 411 | 161.67 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 442 | 161.96 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 443 | 161.97 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 650 | 164.16 | radiation | 1.0 | 90 | > th | dose independent | sin | 8 | NA |
| 656 | 164.24 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 761 | 165.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 772 | 165.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 826 | 166.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 19 |
| 849 | 167.03 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 869 | 167.69 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 870 | 167.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 882 | 167.86 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 904 | 168.39 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 912 | 168.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 917 | 168.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 918 | 168.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 919 | 168.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 920 | 168.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 923 | 168.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 926 | 168.80 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 4 |
| 930 | 168.80 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 939 | 168.80 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 952 | 168.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 20 |
| 960 | 168.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 962 | 168.91 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 998 | 168.95 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 4 |