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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0239900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sulfotransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0241) R2 : 0.00106
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0353 (0.0507) R2dN8 : 0.00137 R2N8 : 0.00106
σ : 0.453
deviance : 94.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.4 0.437 2.93 -0.255 0.133 -0.0487 -0.0892 3.89 -0.0408 10.1 9 22 -- --
87.46 0.436 2.95 -0.23 0.123 -0.903 -0.0768 -- -0.0413 8.84 8.93 40 -- --
86.12 0.432 2.94 -0.263 0.133 -0.152 -- 3.97 -0.0458 9.99 9.005 18 -- --
87.4 0.435 2.95 -0.237 0.137 -0.935 -- -- -0.0452 9.86 9 40 -- --
86.86 0.434 2.94 -0.245 -- -0.408 -- 3.58 -0.0413 -- 9.111 18 -- --
90.07 0.445 2.95 -0.293 0.143 -- -0.285 -- -0.0667 11.6 -- -- -- --
90.38 0.445 2.95 -0.306 0.148 -- -- -- -0.0686 10.8 -- -- -- --
88.22 0.437 2.95 -0.25 -- -0.958 -- -- -0.0539 -- 9.1 40 -- --
88.8 0.439 2.94 -- 0.145 -1.05 -- -- -0.0182 9.94 8.9 40 -- --
91.74 0.448 2.96 -0.309 -- -- -- -- -0.0696 -- -- -- -- --
92.84 0.451 2.95 -- 0.151 -- -- -- -0.0345 11 -- -- -- --
89.48 0.441 2.94 -- -- -1.11 -- -- -0.0136 -- 9.127 40 -- --
94.26 0.453 2.95 -- -- -- -- -- -0.0353 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.40 radiation 40.0 90 < th dose dependent rect. 10 1
3 81.60 radiation 10.0 90 < th dose dependent rect. 10 1
4 81.87 radiation 30.0 90 < th dose independent rect. 10 1
8 82.57 wind 9.0 10 > th dose dependent rect. 11 1
10 82.59 wind 9.0 30 > th dose independent rect. 11 1
93 82.81 wind 9.0 10 > th dose dependent rect. 18 18
105 82.83 humidity 50.0 90 > th dose dependent rect. 10 1
107 82.95 radiation 10.0 90 < th dose independent rect. 10 1
108 82.97 humidity 60.0 90 > th dose independent rect. 10 2
117 83.23 wind 9.0 10 > th dose dependent sin 7 NA
126 83.31 wind 1.0 10 < th dose independent rect. 6 1
129 83.38 wind 9.0 30 < th dose independent sin 6 NA
133 83.47 humidity 60.0 30 > th dose independent rect. 2 8
142 83.57 wind 9.0 30 > th dose independent sin 6 NA
164 83.59 wind 9.0 30 > th dose independent rect. 18 18
190 83.75 radiation 40.0 30 < th dose independent rect. 2 8
192 83.77 atmosphere 1005.0 90 > th dose independent rect. 9 3
233 83.98 radiation 30.0 90 < th dose independent rect. 10 16
245 84.07 radiation 40.0 10 < th dose dependent rect. 12 1
249 84.10 humidity 50.0 90 > th dose dependent rect. 23 11
278 84.22 atmosphere 995.0 90 > th dose dependent rect. 9 3
314 84.28 humidity 60.0 10 > th dose independent rect. 24 10
324 84.29 radiation 40.0 10 < th dose independent rect. 13 21
326 84.29 temperature 10.0 270 > th dose dependent rect. 2 16
329 84.31 humidity 80.0 270 > th dose independent rect. 23 9
331 84.31 temperature 30.0 90 < th dose dependent rect. 10 1
352 84.35 atmosphere 995.0 10 > th dose dependent rect. 10 2
437 84.45 temperature 10.0 90 > th dose dependent rect. 2 18
442 84.46 atmosphere 995.0 10 > th dose dependent rect. 20 17
444 84.47 radiation 40.0 90 < th dose independent rect. 23 11
460 84.51 atmosphere 995.0 270 > th dose dependent rect. 7 5
467 84.52 temperature 10.0 10 > th dose dependent rect. 2 18
478 84.55 radiation 40.0 90 < th dose dependent rect. 10 16
484 84.57 temperature 15.0 270 > th dose independent rect. 2 15
493 84.59 temperature 30.0 270 < th dose dependent rect. 7 5
517 84.64 temperature 30.0 90 < th dose dependent rect. 9 3
528 84.65 humidity 50.0 90 > th dose dependent rect. 2 8
530 84.67 humidity 50.0 10 > th dose independent rect. 20 17
535 84.67 temperature 10.0 10 > th dose dependent rect. 12 22
549 84.71 humidity 50.0 10 > th dose independent rect. 22 15
550 84.71 humidity 60.0 270 > th dose dependent rect. 23 9
577 84.75 wind 1.0 10 > th dose dependent rect. 10 2
588 84.77 atmosphere 995.0 90 > th dose dependent rect. 9 17
589 84.78 radiation 40.0 10 < th dose independent rect. 24 10
601 84.80 wind 9.0 90 < th dose independent rect. 11 23
607 84.81 atmosphere 995.0 10 > th dose dependent rect. 10 16
615 84.82 atmosphere 995.0 10 > th dose dependent rect. 22 15
625 84.84 temperature 30.0 10 < th dose dependent rect. 10 2
628 84.84 temperature 30.0 270 < th dose dependent rect. 7 8
643 84.87 temperature 30.0 10 < th dose dependent rect. 12 1
669 84.90 temperature 20.0 270 < th dose dependent rect. 8 8
684 84.92 humidity 60.0 90 > th dose independent rect. 12 22
702 84.94 radiation 1.0 10 > th dose independent rect. 10 2
708 84.94 radiation 40.0 90 < th dose dependent rect. 2 8
709 84.94 atmosphere 995.0 90 > th dose dependent rect. 9 14
746 84.99 humidity 50.0 270 > th dose dependent rect. 8 4
766 85.02 atmosphere 995.0 270 > th dose dependent rect. 7 16
770 85.03 humidity 70.0 90 > th dose independent rect. 10 16
776 85.03 temperature 30.0 90 < th dose dependent rect. 9 7
779 85.04 temperature 20.0 270 < th dose dependent rect. 8 2
785 85.05 humidity 50.0 10 > th dose independent rect. 10 16
801 85.07 temperature 20.0 90 > th dose independent rect. 12 8
803 85.07 atmosphere 1000.0 90 > th dose independent rect. 20 16
810 85.07 temperature 30.0 90 < th dose dependent rect. 9 17
816 85.09 temperature 10.0 10 > th dose independent rect. 10 2
820 85.09 atmosphere 1015.0 10 < th dose independent rect. 10 2
822 85.09 precipitation 0.1 10 < th dose independent rect. 10 2
825 85.09 temperature 10.0 10 > th dose independent rect. 12 22
826 85.09 atmosphere 1015.0 10 < th dose independent rect. 12 22
828 85.09 precipitation 0.1 10 < th dose dependent rect. 10 2
842 85.10 temperature 10.0 270 > th dose dependent rect. 23 9
844 85.11 wind 1.0 10 > th dose independent rect. 10 2
853 85.12 atmosphere 995.0 10 > th dose independent rect. 12 22
880 85.14 temperature 20.0 270 < th dose dependent rect. 8 4
885 85.14 atmosphere 1015.0 10 < th dose dependent rect. 12 22
895 85.15 temperature 10.0 90 > th dose dependent rect. 12 8
899 85.16 humidity 60.0 270 > th dose independent rect. 7 5
908 85.16 humidity 50.0 90 > th dose independent rect. 21 15
921 85.17 precipitation 0.1 10 < th dose independent rect. 12 22
926 85.17 precipitation 0.1 10 < th dose dependent rect. 12 22
928 85.18 temperature 10.0 1440 > th dose independent rect. 11 2
932 85.18 atmosphere 995.0 1440 > th dose independent rect. 11 2
934 85.18 temperature 10.0 1440 > th dose independent rect. 13 22
947 85.19 temperature 30.0 90 < th dose independent rect. 10 2
960 85.19 radiation 1.0 30 < th dose dependent rect. 5 1
968 85.20 temperature 30.0 270 < th dose dependent rect. 7 19
978 85.21 atmosphere 1000.0 10 > th dose independent rect. 20 17