Os08g0234200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0234200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.06 | 0.258 | 10.3 | -1.16 | 0.401 | -0.00223 | -0.126 | -2.26 | -0.0359 | 18.8 | 8.099 | 4595 | -- | -- |
| 33.84 | 0.273 | 10.3 | -0.672 | 0.373 | 0.337 | -0.0846 | -- | 0.0758 | 19.7 | 8.099 | 4595 | -- | -- |
| 30.08 | 0.255 | 10.4 | -1.16 | 0.403 | -0.00781 | -- | -2.26 | -0.0355 | 18.8 | 8.109 | 4720 | -- | -- |
| 33.86 | 0.273 | 10.3 | -0.67 | 0.373 | 0.339 | -- | -- | 0.0754 | 19.7 | 8.099 | 4595 | -- | -- |
| 38.48 | 0.289 | 10.3 | -1.16 | -- | -0.0253 | -- | -2.23 | -0.0375 | -- | 6.497 | 4288 | -- | -- |
| 34.94 | 0.277 | 10.3 | -0.606 | 0.4 | -- | -0.095 | -- | 0.123 | 18.8 | -- | -- | -- | -- |
| 34.97 | 0.277 | 10.3 | -0.604 | 0.4 | -- | -- | -- | 0.123 | 18.8 | -- | -- | -- | -- |
| 40.1 | 0.295 | 10.3 | -0.708 | -- | 0.464 | -- | -- | 0.0525 | -- | 2.543 | 272 | -- | -- |
| 37.21 | 0.284 | 10.2 | -- | 0.4 | -0.437 | -- | -- | 0.321 | 18.8 | 2.292 | 47520 | -- | -- |
| 43.31 | 0.308 | 10.3 | -0.613 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 44.6 | 0.312 | 10.2 | -- | 0.407 | -- | -- | -- | 0.19 | 18.7 | -- | -- | -- | -- |
| 43.55 | 0.307 | 10.2 | -- | -- | -0.452 | -- | -- | 0.358 | -- | 24.07 | 47520 | -- | -- |
| 53.24 | 0.341 | 10.2 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 6 | 29.21 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 9 | 29.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 10 | 29.23 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 11 | 29.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 13 | 29.25 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 24 | 29.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 33 | 29.31 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 37 | 29.32 | humidity | 90.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 43 | 29.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 16 |
| 56 | 29.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 59 | 29.36 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 60 | 29.36 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 62 | 29.36 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 73 | 29.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 74 | 29.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 93 | 29.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 105 | 29.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 118 | 29.43 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 128 | 29.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 135 | 29.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 164 | 29.45 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 189 | 29.47 | temperature | 20.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 190 | 29.47 | temperature | 20.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 201 | 29.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 203 | 29.47 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 205 | 29.47 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 208 | 29.47 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 223 | 29.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 250 | 29.48 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 291 | 29.49 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 335 | 29.49 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 340 | 29.49 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 341 | 29.49 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 19 |
| 367 | 29.50 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 392 | 29.50 | temperature | 25.0 | 43200 | < th | dose dependent | no | NA | NA |
| 424 | 29.50 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 471 | 29.50 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 16 | 20 |
| 544 | 29.51 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 601 | 29.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 602 | 29.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 604 | 29.52 | wind | 1.0 | 43200 | < th | dose independent | rect. | 13 | 13 |
| 619 | 29.52 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 683 | 29.53 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 717 | 29.53 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 13 |
| 777 | 29.54 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 826 | 29.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 850 | 29.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 879 | 29.56 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 943 | 29.57 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 975 | 29.58 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 984 | 29.58 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 21 |