Os08g0233300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0233300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.12 | 0.316 | 10.4 | -0.0451 | 0.8 | -1.08 | -0.0353 | -0.346 | -0.0914 | 21.4 | 26.07 | 181 | -- | -- |
| 45.26 | 0.313 | 10.4 | -0.0877 | 0.794 | -1.06 | -0.0907 | -- | -0.102 | 21.5 | 26.59 | 181 | -- | -- |
| 45.12 | 0.313 | 10.4 | -0.0453 | 0.799 | -1.08 | -- | -0.345 | -0.0926 | 21.4 | 26.15 | 181 | -- | -- |
| 45.26 | 0.313 | 10.4 | -0.102 | 0.792 | -1.06 | -- | -- | -0.108 | 21.5 | 26.65 | 180 | -- | -- |
| 67.41 | 0.382 | 10.3 | -0.195 | -- | -1.38 | -- | -0.0203 | -0.156 | -- | 29.5 | 629 | -- | -- |
| 61.45 | 0.368 | 10.3 | 0.164 | 0.831 | -- | -0.166 | -- | 0.126 | 20.3 | -- | -- | -- | -- |
| 61.54 | 0.367 | 10.3 | 0.169 | 0.831 | -- | -- | -- | 0.126 | 20.3 | -- | -- | -- | -- |
| 67.4 | 0.382 | 10.3 | -0.204 | -- | -1.38 | -- | -- | -0.16 | -- | 29.49 | 629 | -- | -- |
| 45.51 | 0.314 | 10.4 | -- | 0.793 | -1.02 | -- | -- | -0.0883 | 21.5 | 26.62 | 180 | -- | -- |
| 99.9 | 0.467 | 10.3 | 0.164 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 62.29 | 0.369 | 10.3 | -- | 0.831 | -- | -- | -- | 0.107 | 20.3 | -- | -- | -- | -- |
| 68.39 | 0.385 | 10.3 | -- | -- | -1.31 | -- | -- | -0.126 | -- | 29.5 | 626 | -- | -- |
| 100.61 | 0.468 | 10.3 | -- | -- | -- | -- | -- | 0.0987 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 5 | 43.64 | temperature | 20 | 270 | > th | dose dependent | sin | 9 | NA |
| 7 | 43.97 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 8 | 44.03 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 27 | 44.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 43 | 45.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 55 | 45.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 106 | 46.08 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 111 | 46.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 120 | 46.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 124 | 46.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 125 | 46.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 132 | 46.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 195 | 46.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 205 | 46.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 216 | 46.83 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 220 | 46.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 323 | 47.27 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 342 | 47.37 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 352 | 47.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 356 | 47.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 374 | 47.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 377 | 47.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 398 | 47.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 401 | 47.63 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 404 | 47.65 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 408 | 47.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 422 | 47.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 432 | 47.72 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 438 | 47.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 460 | 47.77 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 475 | 47.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 477 | 47.82 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 500 | 47.86 | temperature | 25 | 1440 | > th | dose independent | sin | 20 | NA |
| 543 | 47.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 626 | 48.14 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 670 | 48.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 769 | 48.36 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 827 | 48.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 840 | 48.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 935 | 48.57 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 969 | 48.61 | temperature | 25 | 1440 | < th | dose independent | rect. | 24 | 22 |