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Os08g0230800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.04 (0.0464) R2 : 0.818
β1 : 3.78 (0.166) R2dD : 0.273 R2D : 0.229
β2 : 3.13 (0.102) R2dC : 0.382 R2C : 0.389
β3 : -0.0146 (0.29) R2dE : 2.93e-06 R2E : -0.0155
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.27 (1.09) R2dD*E : 0.0612 R2D*E : 0.0859
γ1 : 1.24 (0.0902) R2dN8 : 0.112 R2N8 : 0.0671
σ : 0.753
deviance : 261.35
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_____
C
peak time of C : 8.31
E
wheather : wind
threshold : 7.071
memory length : 3499
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.1
open length of G : 1.02

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
257.25 0.754 8.03 3.81 3.13 -0.0695 -1.16 6.9 1.25 8.32 7.099 3514 17.1 1.02
289.95 0.793 7.87 3.99 3.2 -0.849 -1.58 -- 1.46 8.17 6.552 2575 15.7 2.7
261.35 0.753 8.04 3.78 3.13 -0.0146 -- 7.27 1.24 8.31 7.071 3499 17.1 1.02
286.79 0.789 7.82 3.86 3.22 -1.17 -- -- 1.48 8.07 7 2519 16.5 1.8
801.21 1.32 8.07 3.82 -- -0.181 -- 7.66 1.35 -- 6.9 3404 17.2 0.983
324 0.844 7.84 4.14 3.15 -- -1.7 -- 1.53 8.47 -- -- -- --
333.18 0.855 7.84 4.09 3.16 -- -- -- 1.53 8.43 -- -- -- --
426.4 0.962 7.98 5.54 -- -2.43 -- -- 1.36 -- 1.2 599 13.3 5.32
414.24 0.948 7.96 -- 3.65 -2.9 -- -- 0.601 7.47 6.986 47520 17.3 0.3
890.56 1.39 7.92 4.1 -- -- -- -- 1.56 -- -- -- -- --
773.59 1.3 7.94 -- 3.18 -- -- -- 1.08 8.34 -- -- -- --
737.49 1.26 7.85 -- -- -2.75 -- -- 1.53 -- 2.042 616 12.5 5.8
1334.83 1.71 8.02 -- -- -- -- -- 1.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 267.84 humidity 80.0 14400 > th dose independent rect. 21 2
2 270.07 radiation 1.0 1440 < th dose dependent rect. 1 16
5 270.14 radiation 1.0 1440 < th dose dependent rect. 4 13
10 270.39 radiation 1.0 1440 < th dose dependent rect. 19 22
12 270.43 wind 1.0 43200 < th dose dependent rect. 19 1
15 270.55 wind 7.0 4320 > th dose independent rect. 17 1
16 271.08 radiation 1.0 14400 < th dose dependent rect. 19 10
17 271.35 radiation 1.0 14400 < th dose dependent rect. 23 6
19 271.55 wind 7.0 4320 > th dose independent rect. 17 4
20 271.65 radiation 1.0 14400 < th dose independent rect. 9 1
24 271.90 radiation 1.0 14400 > th dose independent rect. 9 1
30 272.05 wind 1.0 43200 < th dose dependent rect. 22 5
31 272.06 wind 7.0 4320 < th dose independent rect. 17 1
38 272.43 wind 7.0 4320 < th dose independent rect. 17 4
39 272.54 radiation 1.0 1440 < th dose independent rect. 11 1
40 272.54 radiation 1.0 1440 < th dose dependent rect. 11 1
41 272.58 wind 1.0 43200 < th dose dependent rect. 17 12
43 273.01 wind 7.0 4320 > th dose dependent rect. 17 2
47 273.28 humidity 60.0 14400 > th dose independent rect. 20 12
50 273.61 wind 7.0 4320 > th dose dependent rect. 17 4
53 273.90 wind 1.0 43200 < th dose dependent rect. 18 10
60 274.41 radiation 1.0 1440 > th dose independent rect. 5 12
62 274.48 radiation 1.0 1440 < th dose independent rect. 5 12
63 274.52 wind 1.0 43200 < th dose dependent rect. 20 7
76 274.65 radiation 1.0 1440 < th dose independent rect. 1 16
83 274.84 radiation 1.0 1440 < th dose independent rect. 19 22
85 274.89 radiation 20.0 43200 > th dose dependent rect. 15 2
103 275.16 humidity 80.0 14400 < th dose independent rect. 21 2
109 275.40 radiation 1.0 1440 < th dose dependent sin 1 NA
162 275.77 radiation 40.0 43200 > th dose dependent rect. 14 1
205 276.12 radiation 1.0 1440 < th dose dependent rect. 11 6
219 276.23 wind 1.0 43200 < th dose independent rect. 19 1
225 276.37 radiation 40.0 43200 < th dose dependent rect. 15 14
233 276.42 radiation 40.0 43200 < th dose dependent rect. 15 10
243 276.45 radiation 40.0 43200 < th dose dependent rect. 15 4
256 276.48 radiation 1.0 1440 < th dose dependent rect. 11 20
257 276.49 wind 9.0 14400 > th dose independent rect. 15 1
261 276.52 wind 1.0 43200 < th dose independent rect. 20 7
266 276.57 radiation 10.0 43200 < th dose dependent rect. 17 14
270 276.63 radiation 10.0 43200 < th dose dependent rect. 16 16
282 276.74 precipitation 0.1 270 > th dose independent rect. 2 2
324 276.86 precipitation 0.1 270 > th dose dependent rect. 2 2
335 276.97 wind 1.0 43200 < th dose dependent sin 14 NA
348 277.13 radiation 20.0 43200 > th dose independent rect. 15 3
364 277.21 wind 1.0 43200 < th dose independent rect. 19 9
370 277.26 radiation 1.0 1440 > th dose independent rect. 11 20
410 277.54 radiation 1.0 1440 < th dose independent rect. 11 20
422 277.59 radiation 30.0 43200 < th dose independent rect. 15 10
425 277.60 radiation 30.0 43200 < th dose independent rect. 15 2
428 277.61 temperature 15.0 14400 > th dose independent rect. 24 1
435 277.62 radiation 10.0 43200 < th dose dependent sin 12 NA
545 278.27 wind 1.0 43200 < th dose independent rect. 17 11
554 278.35 temperature 15.0 14400 < th dose independent rect. 2 1
559 278.39 temperature 15.0 14400 > th dose independent rect. 2 1
561 278.40 wind 1.0 43200 < th dose independent rect. 22 5
617 278.77 wind 9.0 43200 > th dose dependent rect. 16 1
619 278.78 wind 9.0 4320 > th dose independent rect. 15 9
632 278.92 radiation 1.0 1440 > th dose independent sin 1 NA
635 278.94 radiation 1.0 1440 < th dose independent sin 1 NA
638 278.96 radiation 1.0 1440 < th dose dependent rect. 5 15
643 279.00 humidity 60.0 43200 < th dose independent rect. 10 2
645 279.01 radiation 1.0 1440 < th dose dependent rect. 1 19
664 279.11 wind 7.0 43200 > th dose independent rect. 13 1
677 279.13 radiation 1.0 1440 < th dose dependent rect. 5 22
679 279.14 wind 1.0 43200 > th dose independent rect. 20 8
693 279.18 wind 7.0 43200 > th dose dependent rect. 13 4
708 279.21 wind 7.0 43200 < th dose independent rect. 13 1
712 279.23 radiation 1.0 1440 < th dose dependent no NA NA
725 279.28 radiation 1.0 1440 < th dose independent rect. 9 6
731 279.32 radiation 1.0 1440 > th dose independent rect. 13 2
734 279.33 radiation 10.0 43200 < th dose dependent rect. 6 1
737 279.37 radiation 1.0 1440 < th dose independent rect. 12 3
878 279.76 temperature 15.0 14400 > th dose independent rect. 24 3
890 279.87 wind 9.0 14400 > th dose independent rect. 10 4
909 279.91 wind 1.0 43200 < th dose dependent rect. 22 1
912 279.93 wind 9.0 14400 > th dose independent rect. 4 9
913 279.93 radiation 40.0 43200 < th dose dependent sin 14 NA
942 280.06 temperature 15.0 14400 < th dose independent rect. 24 3
950 280.10 wind 9.0 14400 > th dose dependent rect. 11 3
956 280.13 radiation 1.0 1440 > th dose independent rect. 9 6