Os08g0230000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0230000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.23 | 0.206 | 13.2 | 0.693 | 0.515 | -0.375 | -0.0553 | -0.284 | 0.403 | 23 | 10 | 1442 | -- | -- |
| 19.39 | 0.205 | 13.2 | 0.728 | 0.517 | -0.389 | -0.0643 | -- | 0.418 | 23 | 9.343 | 1433 | -- | -- |
| 19.24 | 0.204 | 13.2 | 0.695 | 0.516 | -0.375 | -- | -0.286 | 0.403 | 23 | 10 | 1442 | -- | -- |
| 19.4 | 0.205 | 13.2 | 0.731 | 0.517 | -0.39 | -- | -- | 0.419 | 23 | 9.37 | 1433 | -- | -- |
| 28.71 | 0.251 | 13.2 | 0.672 | -- | -0.605 | -- | -0.0928 | 0.316 | -- | -1.528 | 1656 | -- | -- |
| 25.37 | 0.236 | 13.3 | 0.655 | 0.492 | -- | -0.12 | -- | 0.319 | 22.9 | -- | -- | -- | -- |
| 25.43 | 0.236 | 13.3 | 0.66 | 0.492 | -- | -- | -- | 0.319 | 22.9 | -- | -- | -- | -- |
| 28.73 | 0.251 | 13.2 | 0.669 | -- | -0.605 | -- | -- | 0.315 | -- | -11.36 | 1651 | -- | -- |
| 31.15 | 0.26 | 13.2 | -- | 0.524 | -0.51 | -- | -- | 0.365 | 23.4 | 36.92 | 8612 | -- | -- |
| 40.48 | 0.297 | 13.2 | 0.671 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 36.91 | 0.284 | 13.3 | -- | 0.498 | -- | -- | -- | 0.245 | 23 | -- | -- | -- | -- |
| 40.53 | 0.297 | 13.3 | -- | -- | -0.606 | -- | -- | 0.241 | -- | -11.36 | 1651 | -- | -- |
| 52.33 | 0.338 | 13.3 | -- | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 2 | 18.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 5 | 18.23 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 30 | 18.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 47 | 18.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 51 | 18.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 54 | 18.40 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 66 | 18.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 67 | 18.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 83 | 18.45 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 91 | 18.46 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 117 | 18.50 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 123 | 18.51 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 153 | 18.55 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 176 | 18.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 185 | 18.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 188 | 18.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 193 | 18.60 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 200 | 18.62 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 212 | 18.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 216 | 18.64 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 234 | 18.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 254 | 18.68 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 265 | 18.70 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 278 | 18.71 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 290 | 18.72 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 300 | 18.73 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 345 | 18.76 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 476 | 18.86 | wind | 9.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 486 | 18.87 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 487 | 18.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 494 | 18.88 | wind | 7.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 495 | 18.88 | wind | 5.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 515 | 18.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 550 | 18.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 566 | 18.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 575 | 18.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 579 | 18.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 612 | 18.96 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 655 | 18.99 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 736 | 19.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 741 | 19.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 750 | 19.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 823 | 19.09 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 825 | 19.09 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 861 | 19.11 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 863 | 19.12 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 873 | 19.13 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 887 | 19.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 895 | 19.13 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 15 | 20 |
| 910 | 19.14 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 916 | 19.15 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |