Os08g0227400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TRAF-like domain containing protein.
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Os08g0227400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TRAF-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.06 | 0.412 | 3.32 | 0.114 | 0.141 | 0.326 | -0.0597 | 1.16 | -0.059 | 6.68 | 89.91 | 5900 | -- | -- |
| 78.97 | 0.414 | 3.32 | 0.0424 | 0.13 | 0.371 | -0.0899 | -- | -0.0896 | 6.57 | 91 | 5764 | -- | -- |
| 77.07 | 0.409 | 3.32 | 0.116 | 0.14 | 0.325 | -- | 1.16 | -0.059 | 6.84 | 90.53 | 5897 | -- | -- |
| 78.96 | 0.414 | 3.32 | 0.0406 | 0.14 | 0.361 | -- | -- | -0.0854 | 7.54 | 118.8 | 5509 | -- | -- |
| 78.07 | 0.412 | 3.32 | 0.115 | -- | 0.324 | -- | 1.15 | -0.0552 | -- | 89.86 | 5835 | -- | -- |
| 80.68 | 0.421 | 3.3 | 0.0166 | 0.139 | -- | -0.0805 | -- | -0.0117 | 6.59 | -- | -- | -- | -- |
| 80.69 | 0.421 | 3.3 | 0.0157 | 0.138 | -- | -- | -- | -0.0114 | 6.81 | -- | -- | -- | -- |
| 79.9 | 0.416 | 3.32 | 0.0463 | -- | 0.364 | -- | -- | -0.0866 | -- | 91 | 5717 | -- | -- |
| 78.92 | 0.414 | 3.32 | -- | 0.183 | 0.371 | -- | -- | -0.0998 | 7.28 | 127.3 | 5125 | -- | -- |
| 81.69 | 0.422 | 3.31 | 0.0187 | -- | -- | -- | -- | -0.00868 | -- | -- | -- | -- | -- |
| 80.69 | 0.42 | 3.3 | -- | 0.139 | -- | -- | -- | -0.0131 | 6.8 | -- | -- | -- | -- |
| 79.95 | 0.416 | 3.32 | -- | -- | 0.355 | -- | -- | -0.0879 | -- | 90.98 | 5715 | -- | -- |
| 81.7 | 0.422 | 3.31 | -- | -- | -- | -- | -- | -0.0108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.51 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 70.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 70.08 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 4 | 70.41 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 10 | 70.73 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 11 | 70.73 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 12 | 70.76 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 15 | 70.78 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 24 | 70.84 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 25 | 70.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 28 | 70.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 32 | 70.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 41 | 70.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 42 | 70.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 62 | 70.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 76 | 70.90 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 77 | 70.90 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 78 | 70.90 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 80 | 70.91 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 81 | 70.91 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 83 | 70.92 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 84 | 70.92 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 91 | 70.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 94 | 70.95 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 70.97 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 100 | 70.97 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 101 | 70.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 105 | 70.97 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 107 | 70.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 112 | 70.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 113 | 70.97 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 115 | 70.97 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 119 | 70.97 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 124 | 70.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 125 | 70.98 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 131 | 71.02 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 132 | 71.09 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 134 | 71.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 138 | 71.15 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 142 | 71.17 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 148 | 71.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 149 | 71.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 188 | 71.46 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 16 |
| 189 | 71.46 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 191 | 71.64 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 197 | 71.87 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 202 | 72.17 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 204 | 72.26 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 211 | 72.51 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 218 | 72.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 220 | 72.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 224 | 73.03 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 231 | 73.23 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 259 | 73.41 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 260 | 73.41 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 270 | 73.96 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 278 | 74.45 | wind | 1.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 279 | 74.57 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 304 | 75.09 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 314 | 75.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 315 | 75.27 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 316 | 75.28 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 317 | 75.31 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 326 | 75.42 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 14 |
| 329 | 75.43 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 331 | 75.44 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 337 | 75.48 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 340 | 75.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 341 | 75.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 345 | 75.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 346 | 75.51 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 349 | 75.51 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 350 | 75.52 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 353 | 75.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 354 | 75.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 356 | 75.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 359 | 75.52 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 360 | 75.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 364 | 75.52 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 367 | 75.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 378 | 75.52 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 379 | 75.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 380 | 75.52 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 382 | 75.52 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 387 | 75.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 407 | 75.52 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 411 | 75.52 | humidity | 50.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 412 | 75.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 413 | 75.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 416 | 75.52 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 417 | 75.52 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 422 | 75.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 429 | 75.53 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 430 | 75.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 431 | 75.53 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 432 | 75.53 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 433 | 75.53 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 435 | 75.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 442 | 75.55 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 443 | 75.55 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 456 | 75.60 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 457 | 75.61 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 471 | 75.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 477 | 75.73 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 483 | 75.75 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 511 | 75.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 516 | 75.82 | wind | 9.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 521 | 75.85 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 531 | 75.93 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 536 | 75.93 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 541 | 75.99 | humidity | 90.0 | 720 | > th | dose independent | rect. | 3 | 1 |
| 543 | 75.99 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 12 |
| 552 | 76.05 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 571 | 76.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 572 | 76.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 573 | 76.08 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 12 |
| 583 | 76.09 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 586 | 76.09 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 591 | 76.10 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 12 |
| 599 | 76.12 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 7 |
| 610 | 76.16 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 611 | 76.16 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 642 | 76.22 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 643 | 76.22 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 645 | 76.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 650 | 76.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 659 | 76.25 | wind | 9.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 671 | 76.28 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 8 |
| 672 | 76.28 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 12 |
| 675 | 76.29 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 676 | 76.29 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 12 |
| 677 | 76.29 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 686 | 76.31 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 690 | 76.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 721 | 76.42 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 727 | 76.44 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 12 |
| 729 | 76.44 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 12 |
| 731 | 76.44 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 748 | 76.47 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 753 | 76.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 12 |
| 759 | 76.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 771 | 76.51 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 775 | 76.52 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 786 | 76.53 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 815 | 76.53 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 820 | 76.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 22 |
| 830 | 76.56 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 12 |
| 835 | 76.56 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 846 | 76.59 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 857 | 76.61 | wind | 1.0 | 720 | < th | dose dependent | rect. | 24 | 2 |
| 884 | 76.65 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 886 | 76.66 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 12 |
| 892 | 76.66 | wind | 5.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 895 | 76.67 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 14 | 1 |
| 898 | 76.67 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 927 | 76.70 | wind | 1.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 928 | 76.70 | temperature | 10.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 929 | 76.70 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 931 | 76.70 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 937 | 76.71 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 948 | 76.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 951 | 76.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 965 | 76.75 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 966 | 76.76 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 2 | 1 |
| 968 | 76.76 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 987 | 76.79 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 996 | 76.81 | wind | 9.0 | 720 | < th | dose independent | rect. | 14 | 1 |