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Os08g0218200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.78 (0.0429) R2 : 0.379
β1 : -2.21 (0.157) R2dD : 0.28 R2D : 0.31
β2 : 0.551 (0.106) R2dC : 0.0369 R2C : 0.0326
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.395 (0.0916) R2dN8 : 0.0339 R2N8 : 0.0573
σ : 0.807
deviance : 297.05
__
_____
C
peak time of C : 14.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
276.44 0.781 5.79 -2.24 0.495 0.519 0.591 -2.02 0.157 14.2 9.58 5109 -- --
279.1 0.778 5.82 -1.97 0.492 0.802 0.569 -- 0.198 14.2 8.805 5040 -- --
277.38 0.776 5.79 -2.28 0.489 0.477 -- -1.91 0.121 14.1 9.873 5110 -- --
280.06 0.779 5.83 -1.95 0.504 0.817 -- -- 0.185 14.1 8.807 5100 -- --
290.07 0.793 5.87 -2.33 -- 0.693 -- -1.38 -0.127 -- 10.2 5050 -- --
295.96 0.807 5.78 -2.23 0.548 -- 0.557 -- 0.391 14.6 -- -- -- --
297.05 0.807 5.78 -2.21 0.551 -- -- -- 0.395 14.7 -- -- -- --
291.4 0.795 5.91 -2.22 -- 0.876 -- -- -0.189 -- 10.38 5001 -- --
297.37 0.803 5.66 -- 0.503 2.22 -- -- 0.907 15 5.54 33034 -- --
314.71 0.829 5.79 -2.24 -- -- -- -- 0.381 -- -- -- -- --
426.3 0.966 5.73 -- 0.594 -- -- -- 0.641 14.7 -- -- -- --
313.66 0.825 5.66 -- -- 2.24 -- -- 0.911 -- 5.5 33141 -- --
446.82 0.987 5.73 -- -- -- -- -- 0.629 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 267.77 wind 1.0 270 < th dose dependent rect. 22 1
2 267.87 wind 1.0 270 < th dose independent rect. 22 1
3 267.88 wind 9.0 1440 < th dose independent rect. 3 7
6 270.77 radiation 40.0 4320 > th dose independent rect. 7 3
25 271.64 wind 1.0 30 < th dose dependent rect. 22 4
57 273.90 radiation 40.0 4320 > th dose independent sin 11 NA
59 273.98 wind 5.0 1440 > th dose independent rect. 6 2
60 274.26 wind 5.0 1440 < th dose independent rect. 6 2
62 274.59 radiation 30.0 4320 > th dose dependent rect. 9 1
67 274.91 radiation 30.0 4320 > th dose dependent rect. 7 4
99 275.25 wind 5.0 1440 > th dose independent rect. 4 5
102 275.39 wind 5.0 1440 < th dose independent rect. 4 5
120 275.50 wind 9.0 1440 < th dose independent rect. 7 3
124 275.68 wind 9.0 14400 > th dose dependent rect. 7 4
126 275.72 radiation 1.0 1440 > th dose independent rect. 4 5
136 275.73 radiation 1.0 1440 < th dose independent rect. 23 10
137 275.73 wind 9.0 14400 > th dose dependent rect. 9 2
142 275.76 radiation 1.0 1440 < th dose independent rect. 19 14
167 275.91 radiation 1.0 1440 < th dose independent rect. 4 5
203 276.09 precipitation 0.1 270 < th dose independent rect. 10 23
204 276.09 precipitation 0.1 270 < th dose dependent rect. 10 23
207 276.12 radiation 40.0 4320 < th dose independent rect. 3 8
211 276.13 radiation 40.0 4320 < th dose independent rect. 18 17
213 276.14 radiation 40.0 4320 < th dose independent rect. 7 4
230 276.20 wind 9.0 43200 < th dose independent rect. 7 6
279 276.33 radiation 40.0 4320 < th dose independent rect. 9 1
324 276.51 wind 1.0 30 < th dose dependent rect. 14 12
350 276.63 wind 5.0 1440 > th dose dependent rect. 2 8
351 276.64 temperature 10.0 90 > th dose dependent rect. 9 4
360 276.72 wind 5.0 1440 > th dose dependent rect. 6 2
373 276.75 wind 7.0 1440 > th dose independent rect. 2 1
376 276.75 wind 7.0 1440 > th dose dependent rect. 2 1
382 276.79 wind 9.0 43200 > th dose independent rect. 8 5
387 276.82 wind 9.0 43200 > th dose independent rect. 10 3
410 276.84 temperature 20.0 90 > th dose dependent rect. 9 4
411 276.85 temperature 10.0 270 > th dose dependent rect. 9 1
415 276.89 atmosphere 1015.0 90 < th dose independent rect. 13 20
421 276.92 radiation 30.0 4320 > th dose dependent sin 11 NA
480 277.32 temperature 25.0 30 > th dose independent rect. 10 3
487 277.40 precipitation 0.1 43200 > th dose dependent rect. 18 2
488 277.41 radiation 1.0 1440 > th dose independent sin 8 NA
491 277.42 wind 9.0 1440 < th dose independent rect. 9 1
493 277.44 precipitation 0.1 14400 > th dose dependent rect. 11 3
494 277.45 temperature 30.0 270 < th dose independent rect. 9 1
500 277.47 radiation 1.0 1440 < th dose independent sin 8 NA
502 277.50 precipitation 0.1 90 < th dose independent rect. 13 20
503 277.50 precipitation 0.1 90 < th dose dependent rect. 13 20
511 277.58 precipitation 0.1 14400 > th dose independent rect. 11 3
530 277.77 temperature 10.0 30 > th dose dependent rect. 2 7
546 277.89 atmosphere 1015.0 30 < th dose independent rect. 15 18
547 277.90 atmosphere 1015.0 270 < th dose independent rect. 11 10
563 278.00 wind 1.0 43200 < th dose dependent rect. 16 5
573 278.09 wind 5.0 14400 < th dose dependent rect. 18 1
584 278.13 precipitation 0.1 10 < th dose independent rect. 15 18
586 278.13 precipitation 0.1 10 < th dose dependent rect. 15 18
589 278.16 temperature 30.0 270 < th dose independent rect. 21 14
592 278.18 wind 1.0 90 > th dose independent rect. 9 4
598 278.26 wind 9.0 1440 > th dose independent rect. 9 1
607 278.27 precipitation 0.1 43200 < th dose independent rect. 7 1
608 278.27 precipitation 0.1 43200 < th dose dependent rect. 7 1
618 278.34 radiation 1.0 720 > th dose independent rect. 18 1
631 278.37 temperature 25.0 270 > th dose independent rect. 9 2
637 278.41 precipitation 0.1 1440 > th dose independent rect. 20 10
639 278.42 precipitation 0.1 10 < th dose independent rect. 2 7
642 278.42 precipitation 0.1 10 < th dose dependent rect. 2 7
645 278.43 wind 1.0 10 < th dose dependent rect. 11 15
656 278.49 wind 9.0 43200 > th dose independent rect. 2 11
679 278.54 radiation 40.0 4320 < th dose independent sin 10 NA
684 278.55 wind 5.0 90 < th dose independent rect. 2 7
688 278.56 precipitation 0.1 14400 < th dose independent rect. 12 3
689 278.56 temperature 25.0 1440 < th dose independent rect. 22 10
692 278.56 precipitation 0.1 14400 < th dose dependent rect. 12 3
712 278.59 temperature 10.0 30 > th dose dependent rect. 13 20
715 278.60 wind 1.0 270 < th dose dependent rect. 16 8
735 278.70 wind 9.0 90 < th dose independent rect. 9 4
741 278.71 precipitation 0.1 43200 > th dose dependent rect. 7 1
750 278.78 precipitation 0.1 43200 > th dose independent rect. 7 1
752 278.79 precipitation 0.1 1440 < th dose independent rect. 20 10
753 278.79 precipitation 0.1 1440 < th dose independent rect. 20 13
755 278.79 precipitation 0.1 1440 < th dose dependent rect. 20 10
756 278.79 precipitation 0.1 1440 < th dose dependent rect. 20 13
760 278.82 atmosphere 1015.0 270 < th dose independent rect. 11 21
766 278.85 precipitation 0.1 43200 > th dose dependent rect. 1 4
767 278.86 wind 1.0 270 > th dose independent rect. 9 1
777 278.87 precipitation 0.1 43200 > th dose dependent rect. 3 2
781 278.88 humidity 90.0 270 < th dose independent rect. 9 1
782 278.88 precipitation 0.1 270 < th dose independent rect. 11 10
784 278.88 precipitation 0.1 270 < th dose dependent rect. 11 10
787 278.90 atmosphere 995.0 30 > th dose dependent rect. 9 17
789 278.91 precipitation 0.1 10 < th dose independent rect. 13 20
790 278.91 precipitation 0.1 10 < th dose dependent rect. 13 20
792 278.92 humidity 50.0 4320 > th dose independent rect. 3 7
796 278.93 wind 9.0 90 < th dose dependent rect. 2 7
802 278.97 precipitation 0.1 1440 < th dose independent rect. 4 2
803 278.97 precipitation 0.1 1440 < th dose dependent rect. 4 2
808 278.99 wind 9.0 90 < th dose independent rect. 9 17
817 279.06 temperature 10.0 90 > th dose independent rect. 9 4
818 279.06 atmosphere 995.0 90 > th dose independent rect. 9 4
819 279.06 atmosphere 1015.0 90 < th dose independent rect. 9 4
820 279.06 temperature 10.0 90 > th dose independent rect. 13 20
823 279.06 precipitation 0.1 43200 > th dose dependent rect. 24 6
827 279.07 precipitation 0.1 90 < th dose independent rect. 9 4
831 279.07 precipitation 0.1 90 < th dose dependent rect. 9 4
834 279.10 precipitation 0.1 1440 > th dose independent rect. 20 13
843 279.14 radiation 1.0 90 > th dose independent rect. 9 4
869 279.24 wind 7.0 1440 > th dose dependent rect. 9 1
878 279.27 temperature 10.0 270 > th dose independent rect. 9 1
879 279.27 atmosphere 995.0 270 > th dose independent rect. 9 1
880 279.27 atmosphere 1015.0 270 < th dose independent rect. 9 1
882 279.27 temperature 10.0 270 > th dose independent rect. 10 23
887 279.30 temperature 25.0 1440 > th dose independent rect. 21 11
888 279.30 radiation 20.0 10 < th dose independent rect. 2 19
890 279.31 temperature 10.0 270 > th dose independent rect. 11 10
891 279.31 temperature 10.0 270 > th dose independent rect. 21 14
892 279.31 atmosphere 995.0 270 > th dose independent rect. 21 14
896 279.33 precipitation 0.1 270 < th dose independent rect. 9 1
897 279.33 wind 9.0 270 < th dose independent rect. 21 14
898 279.33 precipitation 0.1 270 < th dose dependent rect. 9 1
912 279.43 humidity 50.0 270 > th dose independent rect. 9 1
913 279.44 wind 9.0 270 < th dose independent rect. 9 1
916 279.45 wind 1.0 14400 > th dose independent rect. 3 2
918 279.46 wind 1.0 43200 < th dose dependent rect. 1 4
926 279.48 humidity 80.0 14400 > th dose independent rect. 8 1
936 279.49 temperature 30.0 90 < th dose independent rect. 9 17
946 279.50 wind 9.0 4320 > th dose dependent rect. 21 18
962 279.54 wind 1.0 10 < th dose independent rect. 22 4
964 279.54 radiation 40.0 30 < th dose independent rect. 2 7
976 279.55 radiation 1.0 30 > th dose independent rect. 9 6
982 279.55 precipitation 0.1 43200 > th dose dependent rect. 3 14
984 279.56 precipitation 0.1 43200 < th dose independent rect. 4 2
986 279.56 precipitation 0.1 43200 < th dose dependent rect. 4 2
988 279.57 wind 9.0 4320 < th dose independent rect. 15 2
993 279.58 temperature 10.0 1440 > th dose independent rect. 3 7
996 279.58 atmosphere 995.0 1440 > th dose independent rect. 3 7
997 279.58 temperature 10.0 1440 > th dose independent rect. 10 17