Os08g0216600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0216600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.34 | 0.227 | 11.1 | -0.323 | 0.168 | 0.527 | 0.0449 | -0.597 | -0.0259 | 19.8 | 29.72 | 1877 | -- | -- |
| 23.37 | 0.225 | 11.1 | -0.426 | 0.175 | 0.48 | 0.0585 | -- | -0.0233 | 19.9 | 29.67 | 1994 | -- | -- |
| 23.34 | 0.225 | 11.1 | -0.324 | 0.17 | 0.529 | -- | -0.6 | -0.0257 | 19.9 | 29.73 | 1892 | -- | -- |
| 23.33 | 0.225 | 11.1 | -0.427 | 0.175 | 0.449 | -- | -- | -0.0109 | 19.8 | 29.57 | 1874 | -- | -- |
| 24.68 | 0.231 | 11.1 | -0.335 | -- | 0.468 | -- | -0.525 | -0.0244 | -- | 29.72 | 1736 | -- | -- |
| 29.77 | 0.256 | 11.1 | -0.544 | 0.112 | -- | -0.0332 | -- | -0.013 | 20.2 | -- | -- | -- | -- |
| 29.78 | 0.256 | 11.1 | -0.543 | 0.112 | -- | -- | -- | -0.0129 | 20.1 | -- | -- | -- | -- |
| 23.67 | 0.227 | 11.1 | -0.409 | -- | 0.426 | -- | -- | -0.0377 | -- | 30.4 | 5960 | -- | -- |
| 27.9 | 0.246 | 11.1 | -- | 0.194 | 0.512 | -- | -- | 0.0363 | 19.6 | 29.5 | 1874 | -- | -- |
| 30.47 | 0.258 | 11.1 | -0.544 | -- | -- | -- | -- | -0.0143 | -- | -- | -- | -- | -- |
| 37.54 | 0.287 | 11.1 | -- | 0.116 | -- | -- | -- | 0.0475 | 19.7 | -- | -- | -- | -- |
| 27.99 | 0.246 | 11.1 | -- | -- | 0.459 | -- | -- | 0.0111 | -- | 29.8 | 5922 | -- | -- |
| 38.26 | 0.289 | 11.1 | -- | -- | -- | -- | -- | 0.046 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 5 | 19.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 23 | 20.43 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 31 | 20.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 35 | 20.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 49 | 21.19 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 55 | 21.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 64 | 21.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 70 | 21.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 71 | 21.49 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 74 | 21.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 78 | 21.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 18 |
| 79 | 21.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 91 | 21.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 93 | 21.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 97 | 21.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 98 | 21.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 123 | 21.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 124 | 21.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 125 | 21.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 126 | 21.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 127 | 21.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 128 | 21.84 | radiation | 40.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 130 | 21.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 136 | 21.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 142 | 21.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 145 | 21.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 6 |
| 157 | 21.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 166 | 21.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 7 |
| 167 | 21.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 171 | 21.95 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 173 | 21.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 174 | 21.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 181 | 21.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 182 | 21.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 183 | 21.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 8 |
| 186 | 21.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 190 | 22.00 | humidity | 60.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 218 | 22.06 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 223 | 22.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 225 | 22.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 228 | 22.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 230 | 22.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 231 | 22.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 237 | 22.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 260 | 22.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 270 | 22.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 7 |
| 275 | 22.17 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 276 | 22.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 290 | 22.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 291 | 22.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 292 | 22.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 299 | 22.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 300 | 22.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 313 | 22.29 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 317 | 22.30 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 318 | 22.30 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 328 | 22.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 8 |
| 330 | 22.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 8 |
| 332 | 22.34 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 337 | 22.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 355 | 22.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 358 | 22.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 361 | 22.39 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 387 | 22.43 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 413 | 22.46 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 424 | 22.47 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 425 | 22.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 435 | 22.49 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 436 | 22.50 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 440 | 22.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 443 | 22.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 446 | 22.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 469 | 22.53 | temperature | 15.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 476 | 22.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 481 | 22.56 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 482 | 22.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 483 | 22.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 484 | 22.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 489 | 22.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 11 | 16 |
| 499 | 22.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 16 |
| 502 | 22.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 506 | 22.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 508 | 22.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 509 | 22.61 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 19 |
| 510 | 22.61 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 514 | 22.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 533 | 22.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 556 | 22.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 591 | 22.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 592 | 22.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 596 | 22.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 647 | 22.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 16 |
| 652 | 22.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 16 |
| 676 | 22.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 700 | 22.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 704 | 22.83 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 710 | 22.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 722 | 22.85 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 7 |
| 824 | 22.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 19 |
| 840 | 22.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 864 | 22.97 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 924 | 23.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 950 | 23.05 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 980 | 23.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 18 |