Os08g0214900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0214900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 313.5 | 0.832 | 3.1 | 0.0975 | 0.0102 | 0.617 | -0.694 | 2.11 | -0.242 | 19.6 | 46.17 | 10 | -- | -- |
| 322.02 | 0.836 | 3.09 | 0.114 | 0.0418 | 0.587 | -1.22 | -- | -0.229 | 20.5 | 46.17 | 10 | -- | -- |
| 314.81 | 0.826 | 3.1 | 0.111 | 0.00931 | 0.625 | -- | 2.3 | -0.235 | 19.5 | 46.18 | 10 | -- | -- |
| 325.75 | 0.841 | 3.1 | 0.177 | 0.0164 | 0.578 | -- | -- | -0.236 | 18.8 | 46.17 | 10 | -- | -- |
| 314.8 | 0.826 | 3.11 | 0.111 | -- | 0.617 | -- | 2.26 | -0.244 | -- | 46.18 | 10 | -- | -- |
| 328.96 | 0.85 | 3.1 | 0.113 | 0.197 | -- | 0.942 | -- | -0.239 | 11.1 | -- | -- | -- | -- |
| 332.25 | 0.854 | 3.1 | 0.154 | 0.212 | -- | -- | -- | -0.233 | 13 | -- | -- | -- | -- |
| 325.77 | 0.841 | 3.1 | 0.161 | -- | 0.57 | -- | -- | -0.235 | -- | 46.17 | 10 | -- | -- |
| 326.19 | 0.841 | 3.1 | -- | 0.0697 | 0.537 | -- | -- | -0.241 | 13.9 | 46.24 | 10 | -- | -- |
| 335.06 | 0.855 | 3.1 | 0.146 | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
| 332.88 | 0.853 | 3.1 | -- | 0.21 | -- | -- | -- | -0.25 | 12.9 | -- | -- | -- | -- |
| 326.46 | 0.842 | 3.1 | -- | -- | 0.57 | -- | -- | -0.251 | -- | 46.17 | 10 | -- | -- |
| 335.62 | 0.855 | 3.1 | -- | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.14 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 2 |
| 31 | 309.23 | wind | 9 | 30 | > th | dose independent | rect. | 1 | 10 |
| 35 | 309.23 | wind | 7 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 43 | 309.27 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 47 | 309.27 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 51 | 309.35 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 92 | 309.41 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 96 | 309.41 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 134 | 309.57 | wind | 7 | 30 | > th | dose dependent | rect. | 7 | 4 |
| 247 | 309.96 | wind | 7 | 90 | > th | dose independent | rect. | 22 | 1 |
| 249 | 309.96 | wind | 7 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 292 | 311.44 | radiation | 30 | 10 | > th | dose dependent | rect. | 9 | 4 |
| 332 | 312.67 | wind | 7 | 30 | > th | dose independent | rect. | 7 | 4 |
| 340 | 312.74 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 4 |
| 382 | 312.97 | wind | 1 | 30 | < th | dose dependent | rect. | 10 | 3 |
| 417 | 313.35 | radiation | 30 | 10 | > th | dose dependent | sin | 3 | NA |
| 503 | 313.68 | wind | 1 | 90 | < th | dose independent | rect. | 10 | 3 |
| 598 | 314.02 | radiation | 30 | 10 | > th | dose dependent | no | NA | NA |
| 735 | 314.17 | radiation | 30 | 10 | > th | dose dependent | rect. | 11 | 23 |