Os08g0213100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0213100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.78 | 0.689 | 2.94 | -0.026 | 0.0159 | 1.39 | -0.806 | 0.614 | 0.0741 | 19.8 | 1015 | 10 | -- | -- |
| 218.98 | 0.695 | 2.94 | -0.0166 | 0.0113 | 1.4 | -0.791 | -- | 0.0757 | 19.6 | 1015 | 11 | -- | -- |
| 220.21 | 0.696 | 2.94 | -0.00607 | 0.0847 | 1.35 | -- | 0.412 | 0.0711 | 1.35 | 1015 | 10 | -- | -- |
| 220.3 | 0.696 | 2.94 | -0.000998 | 0.0845 | 1.36 | -- | -- | 0.0721 | 1.35 | 1015 | 16 | -- | -- |
| 220.65 | 0.696 | 2.94 | -0.00268 | -- | 1.39 | -- | 0.409 | 0.0734 | -- | 1015 | 10 | -- | -- |
| 226.68 | 0.706 | 2.94 | -0.0188 | 0.0514 | -- | -0.737 | -- | 0.0598 | 20.1 | -- | -- | -- | -- |
| 227.45 | 0.706 | 2.94 | -0.00297 | 0.127 | -- | -- | -- | 0.0562 | 0.838 | -- | -- | -- | -- |
| 220.74 | 0.695 | 2.94 | 0.00234 | -- | 1.4 | -- | -- | 0.0743 | -- | 1015 | 24 | -- | -- |
| 220.3 | 0.695 | 2.94 | -- | 0.0845 | 1.36 | -- | -- | 0.0722 | 1.35 | 1015 | 16 | -- | -- |
| 228.46 | 0.706 | 2.94 | 0.00169 | -- | -- | -- | -- | 0.0586 | -- | -- | -- | -- | -- |
| 227.45 | 0.705 | 2.94 | -- | 0.127 | -- | -- | -- | 0.0566 | 0.837 | -- | -- | -- | -- |
| 220.74 | 0.694 | 2.94 | -- | -- | 1.4 | -- | -- | 0.0741 | -- | 1015 | 24 | -- | -- |
| 228.46 | 0.706 | 2.94 | -- | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.42 | humidity | 80.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 5 | 206.42 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 7 | 206.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 43 | 209.22 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 53 | 209.63 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 68 | 210.15 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 96 | 210.81 | wind | 5.0 | 30 | > th | dose independent | rect. | 24 | 6 |
| 110 | 211.32 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 111 | 211.32 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 133 | 211.62 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 136 | 211.73 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 140 | 211.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 144 | 211.76 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 2 |
| 145 | 211.76 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 182 | 212.23 | wind | 5.0 | 10 | > th | dose independent | rect. | 23 | 10 |
| 195 | 212.40 | wind | 5.0 | 10 | > th | dose dependent | rect. | 23 | 10 |
| 208 | 212.71 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 3 |
| 263 | 213.49 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 3 |
| 268 | 213.55 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 344 | 214.38 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 346 | 214.41 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 347 | 214.41 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 10 |
| 353 | 214.42 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 468 | 214.80 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 22 | 1 |
| 554 | 215.63 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 555 | 215.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 575 | 215.80 | wind | 7.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 577 | 215.80 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 618 | 215.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 3 |
| 687 | 216.31 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 688 | 216.32 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 692 | 216.33 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 699 | 216.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 709 | 216.38 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 731 | 216.45 | humidity | 90.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 749 | 216.55 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 2 |
| 811 | 216.97 | wind | 3.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 217.00 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 827 | 217.05 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 852 | 217.20 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 854 | 217.21 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 859 | 217.23 | wind | 5.0 | 720 | > th | dose dependent | rect. | 22 | 2 |
| 877 | 217.39 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 905 | 217.56 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 11 |
| 925 | 217.67 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 947 | 217.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 948 | 217.76 | humidity | 80.0 | 720 | > th | dose independent | sin | 8 | NA |
| 958 | 217.81 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 991 | 217.92 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 1 |